RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 H6PDO95479 791 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 UCHL3P15374 230 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 TECP42680 631 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 SLC9A3P48764 834 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 PDIA2Q13087 525 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 TXNRD1Q16881 649 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 KYAT3Q6YP21 454 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 KRT25Q7Z3Z0 450 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 E2F7Q96AV8 911 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 HES6Q96HZ4 224 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 C7orf25Q9BPX7 421 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 METTL22Q9BUU2 404 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 NMUR2Q9GZQ4 415 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 PUS7LQ9H0K6 701 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 AVENQ9NQS1 362 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 DEPDC5O75140 1603 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 TNKSO95271 1327 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 LOC100653049A0A140TA62 436 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 CCDC195A0A1B0GUA6 201 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 PDZK1P1A8MUH7 402 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 AQP9O43315 295 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ADAM23O75077 832 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 KRT34O76011 436 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 UFL1O94874 794 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 BMP10O95393 424 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 PROCP04070 461 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ETV3P41162 512 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 NAPAP54920 295 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 AQP5P55064 265 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 GPC5P78333 572 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 NTRK3Q16288 839 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 PKN2Q16513 984 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ATG14Q6ZNE5 492 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ZBTB46Q86UZ6 589 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ACAT2Q9BWD1 397 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 RUBCNLQ9H714 662 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 COPS7BQ9H9Q2 264 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 CXorf21Q9HAI6 301 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 GDAP2Q9NXN4 497 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 SCAF8Q9UPN6 1271 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 RWDD3Q9Y3V2 267 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 SRCAPQ6ZRS2 3230 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 KIF1BO60333 1816 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 A0A1W2PQ72 361 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ICMTO60725 284 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 CCNKO75909 580 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 MUTP22033 750 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ADSLP30566 484 aaPredicted RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 SLC25A3Q00325 362 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 CENPPQ6IPU0 288 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 XKR5Q6UX68 686 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 TCP10LQ8TDR4 215 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 CHPT1Q8WUD6 406 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 TRUB1Q8WWH5 349 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 DLG3Q92796 817 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ZSWIM1Q9BR11 485 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 RHOBTB2Q9BYZ6 727 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 GINM1Q9NU53 330 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ZNF221Q9UK13 617 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 ZC3H13Q5T200 1668 aaKnown RBP8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 FRMPD4Q14CM0 1322 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 TET3O43151 1660 aa8.5□□□□□ -1.05
CRNKL1-205ENST00000496549 C16orf96A6NNT2 1141 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 CYP26A1O43174 497 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 ATF3P18847 181 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 ITGAXP20702 1163 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 TCIRG1Q13488 830 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 GEN1Q17RS7 908 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 ZBED5Q49AG3 693 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 DCAF6Q58WW2 860 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 C6orf52Q5T4I8 152 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 SIGIRRQ6IA17 410 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 SPOPLQ6IQ16 392 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 UGT2A3Q6UWM9 527 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 ZDHHC24Q6UX98 284 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 ZNF571Q7Z3V5 609 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 PBXIP1Q96AQ6 731 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 C12orf43Q96C57 262 aaKnown RBP8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 PGBD4Q96DM1 585 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 MAGED4Q96JG8 741 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 FAM111AQ96PZ2 611 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 CSRNP1Q96S65 589 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 CTRCQ99895 268 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 H0Y626 953 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 DENRO43583 198 aaKnown RBP8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 TGDSO95455 350 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 NR4A1P22736 598 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 GJA9P57773 515 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 HLFQ16534 295 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 CYP2A13Q16696 494 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 ATAD3BQ5T9A4 648 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 ZNF354CQ86Y25 554 aa8.49□□□□□ -1.05
CRNKL1-205ENST00000496549 IFNL3Q8IZI9 196 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms