RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SLC29A4Q7RTT9 530 aa6.97□□□□□ -1.29
SF3B1-212ENST00000496458 WDR53Q7Z5U6 358 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-212ENST00000496458 SPSB4Q96A44 273 aa6.97□□□□□ -1.29
SF3B1-212ENST00000496458 NMD3Q96D46 503 aaKnown RBP6.97□□□□□ -1.29
SF3B1-212ENST00000496458 CCNL1Q9UK58 526 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-212ENST00000496458 SNX14Q9Y5W7 946 aa6.97□□□□□ -1.29
SF3B1-212ENST00000496458 MBD3L4A6NDZ8 208 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-212ENST00000496458 MBD3L3A6NE82 208 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-212ENST00000496458 MANSC4A6NHS7 340 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-212ENST00000496458 PYCARD-AS1I3L0S3 204 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 MGEA5O60502 916 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 VNN1O95497 513 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 HRGP04196 525 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 MYF5P13349 255 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 KLRC1P26715 233 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 RPS16P62249 146 aaKnown RBP6.96□□□□□ -1.3
SF3B1-212ENST00000496458 FMO1Q01740 532 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 GALEQ14376 348 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 LY6KQ17RY6 165 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 AARS2Q5JTZ9 985 aaKnown RBP6.96□□□□□ -1.3
SF3B1-212ENST00000496458 FCRLBQ6BAA4 426 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 ABRAQ8N0Z2 381 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 SOCS4Q8WXH5 440 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 PPP2R3CQ969Q6 453 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 APIPQ96GX9 242 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 PPP1R9BQ96SB3 815 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 STK31Q9BXU1 1019 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 ZNF287Q9HBT7 754 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 DUSP22Q9NRW4 184 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 TRMT13Q9NUP7 481 aaKnown RBP6.96□□□□□ -1.3
SF3B1-212ENST00000496458 SH3BP4Q9P0V3 963 aa6.96□□□□□ -1.3
SF3B1-212ENST00000496458 RASSF9O75901 435 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 RHCEP18577 417 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 TPTEP56180 551 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 RHDQ02161 417 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 PTCHD3Q3KNS1 767 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 PCID2Q5JVF3 399 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 CACHD1Q5VU97 1274 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 CEP85Q6P2H3 762 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 ZNF804AQ7Z570 1209 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 IZUMO1Q8IYV9 350 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 SPARTQ8N0X7 666 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 FANCBQ8NB91 859 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 TBC1D5Q92609 795 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 TIFAQ96CG3 184 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 GBA2Q9HCG7 927 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-212ENST00000496458 COL20A1Q9P218 1284 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 SERGEFQ9UGK8 458 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 PCDHGB6Q9Y5F9 930 aa6.95□□□□□ -1.3
SF3B1-212ENST00000496458 ARHGEF17Q96PE2 2063 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-212ENST00000496458 TARM1B6A8C7 271 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 ZNF213O14771 459 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 TMEM119Q4V9L6 283 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 COLEC12Q5KU26 742 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 CERCAMQ5T4B2 595 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 SLC9A4Q6AI14 798 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 SUMO4Q6EEV6 95 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 Q6ZWC4 215 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 PARS2Q7L3T8 475 aaKnown RBP6.94□□□□□ -1.3
SF3B1-212ENST00000496458 CAND1Q86VP6 1230 aaKnown RBP6.94□□□□□ -1.3
SF3B1-212ENST00000496458 SESTD1Q86VW0 696 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 RP9Q8TA86 221 aaKnown RBP6.94□□□□□ -1.3
SF3B1-212ENST00000496458 DNAJB14Q8TBM8 379 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 HASPINQ8TF76 798 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 VOPP1Q96AW1 172 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 FSD1LQ9BXM9 530 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 HDAC9Q9UKV0 1011 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 ADAMTS5Q9UNA0 930 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 FRMD4BQ9Y2L6 1034 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 CDY1Q9Y6F8 540 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 AOX1Q06278 1338 aa6.94□□□□□ -1.3
SF3B1-212ENST00000496458 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 H7C4K7 107 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 SRGAP2O75044 1071 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 RASAL1O95294 804 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 NPSP0C0P6 89 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 CTGFP29279 349 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 INSCQ1MX18 579 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 NAPRTQ6XQN6 538 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 DPY19L3Q6ZPD9 716 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 PTF1AQ7RTS3 328 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 KCTD20Q7Z5Y7 419 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 REPS1Q96D71 796 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 C17orf80Q9BSJ5 609 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 DPCDQ9BVM2 203 aaPredicted RBP6.93□□□□□ -1.3
SF3B1-212ENST00000496458 XPNPEP3Q9NQH7 507 aa6.93□□□□□ -1.3
SF3B1-212ENST00000496458 JTBO76095 146 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 ITGA8P53708 1063 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 CYP4F2P78329 520 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 SEMA5AQ13591 1074 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 CYB5RLQ6IPT4 315 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 MACROD1Q9BQ69 325 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 APOL5Q9BWW9 433 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 DNMT3BQ9UBC3 853 aaKnown RBP6.92□□□□□ -1.3
SF3B1-212ENST00000496458 KAT6AQ92794 2004 aa6.92□□□□□ -1.3
SF3B1-212ENST00000496458 WIPF3A6NGB9 483 aa6.91□□□□□ -1.3
SF3B1-212ENST00000496458 RGS10O43665 173 aa6.91□□□□□ -1.3
SF3B1-212ENST00000496458 PARNO95453 639 aaKnown RBP6.91□□□□□ -1.3
SF3B1-212ENST00000496458 PTDSS1P48651 473 aaKnown RBP6.91□□□□□ -1.3
SF3B1-212ENST00000496458 CCNIQ14094 377 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms