RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MYLPFQ96A32 169 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 CHFRQ96EP1 664 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 MYRFLQ96LU7 910 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 SLC22A12Q96S37 553 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 CYP2S1Q96SQ9 504 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 KIAA1586Q9HCI6 787 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 CDV3Q9UKY7 258 aaKnown RBP15.37■□□□□ 0.05
CXCL12-208ENST00000496375 CDH9Q9ULB4 789 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 TRAF3IP3Q9Y228 551 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 GREB1Q4ZG55 1949 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 ANAPC1Q9H1A4 1944 aa15.37■□□□□ 0.05
CXCL12-208ENST00000496375 TRAV19A0A0A6YYK7 116 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 TRDMT1O14717 391 aaKnown RBP15.36■□□□□ 0.05
CXCL12-208ENST00000496375 CKMP06732 381 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 RETP07949 1114 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 PDGFRBP09619 1106 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 HOXA6P31267 233 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 MAGEA11P43364 429 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 ATXN1P54253 815 aaKnown RBP15.36■□□□□ 0.05
CXCL12-208ENST00000496375 AMPD2Q01433 879 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 MTF1Q14872 753 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 PDGFRLQ15198 375 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 SNRNP35Q16560 246 aaKnown RBP15.36■□□□□ 0.05
CXCL12-208ENST00000496375 ZCWPW2Q504Y3 356 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 ZNF658Q5TYW1 1059 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-208ENST00000496375 TRAPPC11Q7Z392 1133 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-208ENST00000496375 WDR5BQ86VZ2 330 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 MMS19Q96T76 1030 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
CXCL12-208ENST00000496375 MAGEC2Q9UBF1 373 aaPredicted RBP15.36■□□□□ 0.05
CXCL12-208ENST00000496375 PTPRDP23468 1912 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 RALGAPA1Q6GYQ0 2036 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 CLIC2O15247 247 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 EGFP01133 1207 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 USP17L7P0C7H9 530 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 DLATP10515 647 aaKnown RBP15.35■□□□□ 0.05
CXCL12-208ENST00000496375 WARSP23381 471 aaKnown RBP15.35■□□□□ 0.05
CXCL12-208ENST00000496375 BDNFP23560 247 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 GJA4P35212 333 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 CYP2J2P51589 502 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 CYP27A1Q02318 531 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 USP4Q13107 963 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 MAPRE1Q15691 268 aaKnown RBP15.35■□□□□ 0.05
CXCL12-208ENST00000496375 ZNF77Q15935 545 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 VSTM1Q6UX27 236 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 CEP68Q76N32 757 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 ARL14EPQ8N8R7 260 aaPredicted RBP15.35■□□□□ 0.05
CXCL12-208ENST00000496375 FNBP1Q96RU3 617 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 CGRRF1Q99675 332 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 ECT2Q9H8V3 914 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 FBRSL1Q9HCM7 1045 aaKnown RBP15.35■□□□□ 0.05
CXCL12-208ENST00000496375 DUS2Q9NX74 493 aaKnown RBP15.35■□□□□ 0.05
CXCL12-208ENST00000496375 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.35■□□□□ 0.05
CXCL12-208ENST00000496375 NCOR2Q9Y618 2525 aa15.35■□□□□ 0.05
CXCL12-208ENST00000496375 C2orf78A6NCI8 922 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 LRP3O75074 770 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 RNF40O75150 1001 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 CST3P01034 146 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-208ENST00000496375 TNNI1P19237 187 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 GRIK1P39086 918 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 IFNAR2P48551 515 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 PXNP49023 591 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-208ENST00000496375 GALK1P51570 392 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 MCCD1P59942 119 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-208ENST00000496375 CYP24A1Q07973 514 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 MORC3Q14149 939 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 PSMD6Q15008 389 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 NAIF1Q69YI7 327 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-208ENST00000496375 FOXR2Q6PJQ5 311 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 CPA6Q8N4T0 437 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 TRIML1Q8N9V2 468 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 XXYLT1Q8NBI6 393 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 OSCP1Q8WVF1 389 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 CCDC127Q96BQ5 260 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 SPATA17Q96L03 361 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 P2RY13Q9BPV8 354 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 SNX25Q9H3E2 840 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 SEMA4GQ9NTN9 838 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 MAN1B1Q9UKM7 699 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 WNT6Q9Y6F9 365 aa15.34■□□□□ 0.05
CXCL12-208ENST00000496375 HELZP42694 1942 aaKnown RBP15.33■□□□□ 0.05
CXCL12-208ENST00000496375 ATG13O75143 517 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 DRD1P21728 446 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 ANXA13P27216 316 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 GNL1P36915 607 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-208ENST00000496375 PPP1R2P41236 205 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 TNNC1P63316 161 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 EDRF1Q3B7T1 1238 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 MDH1BQ5I0G3 518 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 DENND5BQ6ZUT9 1274 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 FAM160A2Q8N612 972 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-208ENST00000496375 OR6B3Q8NGW1 331 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 SH3RF2Q8TEC5 729 aa15.33■□□□□ 0.04
CXCL12-208ENST00000496375 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms