RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 MYLK2Q9H1R3 596 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 TBC1D23Q9NUY8 699 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 TBCCD1Q9NVR7 557 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 MRPS18AQ9NVS2 196 aaKnown RBP6.92□□□□□ -1.3
CCDC39-207ENST00000495817 SYBUQ9NX95 663 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 SHOC2Q9UQ13 582 aa6.92□□□□□ -1.3
CCDC39-207ENST00000495817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 E7ENX8 843 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 GCP02774 474 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 IDEP14735 1019 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 GABRB3P28472 473 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 TAP2Q03519 686 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 SCAPQ12770 1279 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 ARHGEF7Q14155 803 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 NPY5RQ15761 445 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 PFKFB4Q16877 469 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 PLA1AQ53H76 456 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 HECTD2Q5U5R9 776 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 RRAGBQ5VZM2 374 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 SP5Q6BEB4 398 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-207ENST00000495817 FBXO38Q6PIJ6 1188 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 ZDHHC24Q6UX98 284 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 CLNKQ7Z7G1 428 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 KRT73Q86Y46 540 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 MYCT1Q8N699 235 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 SMCR8Q8TEV9 937 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-207ENST00000495817 ASB10Q8WXI3 467 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 RAPGEF4Q8WZA2 1011 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 LINC00476Q8WZB0 136 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 SLC9A6Q92581 669 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 LRRC46Q96FV0 321 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 LTV1Q96GA3 475 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-207ENST00000495817 SNX27Q96L92 541 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 SLC46A1Q96NT5 459 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 RMDN3Q96TC7 470 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 IKZF4Q9H2S9 585 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 FAM83DQ9H4H8 585 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 TMEM8AQ9HCN3 771 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 HEYLQ9NQ87 328 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-207ENST00000495817 RGL1Q9NZL6 768 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 DMRT1Q9Y5R6 373 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 RAD54BQ9Y620 910 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 DGKBQ9Y6T7 804 aa6.91□□□□□ -1.3
CCDC39-207ENST00000495817 CCDC78A2IDD5 438 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 FAM234BA2RU67 622 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 PODXLO00592 558 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 DCLK1O15075 740 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 VPS4BO75351 444 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 ITGAMP11215 1152 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 KCNA2P16389 499 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 LRPAP1P30533 357 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 CPT1AP50416 773 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 LOXL3P58215 753 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 GALNT1Q10472 559 aaPredicted RBP6.9□□□□□ -1.3
CCDC39-207ENST00000495817 FOXO1Q12778 655 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 BOP1Q14137 746 aaKnown RBP6.9□□□□□ -1.3
CCDC39-207ENST00000495817 RAB30Q15771 203 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 MGAT5BQ3V5L5 792 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 ARL6IP4Q66PJ3 421 aaKnown RBP6.9□□□□□ -1.3
CCDC39-207ENST00000495817 FCRL6Q6DN72 434 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 LDHAL6AQ6ZMR3 332 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 CACNA2D3Q8IZS8 1091 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 PSD4Q8NDX1 1056 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 NACC2Q96BF6 587 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 EVI5LQ96CN4 794 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 C18orf8Q96DM3 657 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 SLITRK6Q9H5Y7 841 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 CTTNBP2NLQ9P2B4 639 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 DKK4Q9UBT3 224 aa6.9□□□□□ -1.3
CCDC39-207ENST00000495817 TESQ9UGI8 421 aaKnown RBP6.9□□□□□ -1.3
CCDC39-207ENST00000495817 A0A087WZ62 844 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 PRAMEF33A0A0G2JMD5 474 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 AQP7P3A6NL99 342 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 RAB27BO00194 218 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 SYT5O00445 386 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 NPC1O15118 1278 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 NPHP1O15259 732 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 PRAMEF10O60809 474 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 NDST3O95803 873 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 HSD3B1P14060 373 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 PAX3P23760 479 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 GCLCP48506 637 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-207ENST00000495817 RENBPP51606 427 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 BIRC3Q13489 604 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 PTK2BQ14289 1009 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 SPARCL1Q14515 664 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 PLAG1Q6DJT9 500 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 TAF2Q6P1X5 1199 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 GGT6Q6P531 493 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 LAYNQ6UX15 382 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 TMPRSS9Q7Z410 1059 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 GPR149Q86SP6 731 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 Q8NA96 180 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 GLIS1Q8NBF1 620 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 BEND2Q8NDZ0 799 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 TRAPPC12Q8WVT3 735 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 LRIG1Q96JA1 1093 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 TTYH3Q9C0H2 523 aa6.89□□□□□ -1.31
CCDC39-207ENST00000495817 UNKLQ9H9P5 680 aaKnown RBP6.89□□□□□ -1.31
CCDC39-207ENST00000495817 OBP2BQ9NPH6 170 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms