RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 MYL7Q01449 175 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 UBE3AQ05086 875 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CETN1Q12798 172 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ELAVL2Q12926 359 aaKnown RBP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 MYO1EQ12965 1108 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 GPM6BQ13491 265 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CBWD6Q4V339 395 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CBWD3Q5JTY5 395 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CBWD5Q5RIA9 395 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 FUT10Q6P4F1 479 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 DDX53Q86TM3 631 aaKnown RBP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TMEM173Q86WV6 379 aaPredicted RBP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CCDC150Q8NCX0 1101 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CXorf38Q8TB03 319 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 BCL7CQ8WUZ0 217 aaPredicted RBP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 IMPG2Q9BZV3 1241 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 MUC3BQ9H195 1237 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KCNK4Q9NYG8 393 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PUF60Q9UHX1 559 aaKnown RBP10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 LZTS1Q9Y250 596 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TSC2P49815 1807 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 VWA8A3KMH1 1905 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TRANK1O15050 2925 aa10.85□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ATG2AQ2TAZ0 1938 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ARHGEF37A1IGU5 675 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KPNA7A9QM74 516 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PES1O00541 588 aaKnown RBP10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 PMM2O15305 246 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 P4HA2O15460 535 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 VNN1O95497 513 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 HLA-DRAP01903 254 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ATICP31939 592 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 BRCC3P46736 316 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 LILRA4P59901 499 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 KRT31Q15323 416 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SGSM1Q2NKQ1 1148 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 VWA3BQ502W6 1294 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 CD300LGQ6UXG3 332 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 DSTYKQ6XUX3 929 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 FBXL13Q8NEE6 735 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 SPPL3Q8TCT6 385 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TAF4BQ92750 862 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 HPDLQ96IR7 371 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 GPR62Q9BZJ7 368 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ZMYND15Q9H091 742 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 HSD3B7Q9H2F3 369 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 NDST4Q9H3R1 872 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 ALG13Q9NP73 1137 aaKnown RBP10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 RAB20Q9NX57 234 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 TAB2Q9NYJ8 693 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 LIMA1Q9UHB6 759 aaKnown RBP10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 RNF112Q9ULX5 631 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 COQ4Q9Y3A0 265 aa10.84□□□□□ -0.67
RAB11FIP3-211ENST00000495663 EFEMP2O95967 443 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 SOD2P04179 222 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 ODC1P11926 461 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 IGFBP6P24592 240 aaPredicted RBP10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 AARSP49588 968 aaKnown RBP eCLIP10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 MYL6P60660 151 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 BMS1Q14692 1282 aaKnown RBP10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 ZNF699Q32M78 642 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 USP41Q3LFD5 358 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 TIGD5Q53EQ6 642 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 FAM171A1Q5VUB5 890 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 SCARA3Q6AZY7 606 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 Q6ZS46 218 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 ACAD11Q709F0 780 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 ZNF438Q7Z4V0 828 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 RNF168Q8IYW5 571 aaPredicted RBP10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 VPS52Q8N1B4 723 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 CACTIN-AS1Q8N1I8 211 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 RNF214Q8ND24 703 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 TAS1R2Q8TE23 839 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 GDPD5Q8WTR4 605 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 POF1BQ8WVV4 589 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 SENP8Q96LD8 212 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 HERC2P3Q9BVR0 1158 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 LMAN2LQ9H0V9 348 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 VPS16Q9H269 839 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 TTYH1Q9H313 450 aaPredicted RBP10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 TLR9Q9NR96 1032 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 GDAP2Q9NXN4 497 aa10.83□□□□□ -0.68
RAB11FIP3-211ENST00000495663 GTPBP10A4D1E9 387 aaKnown RBP10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 EPOPA6NHQ4 379 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 LRRC10BA6NIK2 292 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 I3L4J1 428 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 M0QZQ0 153 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 CYB561D2O14569 222 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 SYN3O14994 580 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 GRM6O15303 877 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 HUS1O60921 280 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 ASS1P00966 412 aaKnown RBP10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 URODP06132 367 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 ATP1A3P13637 1013 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 P4HA1P13674 534 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 EPHA1P21709 976 aa10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 CD68P34810 354 aaPredicted RBP10.82□□□□□ -0.68
RAB11FIP3-211ENST00000495663 GLUD2P49448 558 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms