RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CCR2P41597 374 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 CACNA2D1P54289 1103 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 APBA1Q02410 837 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 SYCP1Q15431 976 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 TEAD2Q15562 447 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 PRSS36Q5K4E3 855 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 KLHDC7AQ5VTJ3 777 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 ARHGAP17Q68EM7 881 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 NPAS3Q8IXF0 933 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 ANKRD52Q8NB46 1076 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 SHKBP1Q8TBC3 707 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 MYRFLQ96LU7 910 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 SLITRK1Q96PX8 696 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 SMOQ99835 787 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 LRRC3Q9BY71 257 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 SIX2Q9NPC8 291 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 FAM207AQ9NSI2 230 aaPredicted RBP12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 EPS15L1Q9UBC2 864 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 LIMD1Q9UGP4 676 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 ZMYM5Q9UJ78 669 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 DAAM1Q9Y4D1 1078 aa12.79□□□□□ -0.36
CSNK1E-213ENST00000495232 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 ABL1P00519 1130 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 UCHL3P15374 230 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 GJA1P17302 382 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 DDX6P26196 483 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 YWHAQP27348 245 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 GNA15P30679 374 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 PPP3CCP48454 512 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 SLC5A3P53794 718 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 BCAT1P54687 386 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 PTK2Q05397 1052 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 GPR158Q5T848 1215 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 CLEC20AQ6ZU45 233 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 GAREM2Q75VX8 874 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 RNF135Q8IUD6 432 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 SHC3Q92529 594 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 NXPE3Q969Y0 559 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 PNPLA8Q9NP80 782 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 COMMD8Q9NX08 183 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 TRPM5Q9NZQ8 1165 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 IGSF9Q9P2J2 1179 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 NOTCH4Q99466 2003 aa12.78□□□□□ -0.36
CSNK1E-213ENST00000495232 M0QYV0 167 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 THAP12O43422 761 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 BEST1O76090 585 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 F11P03951 625 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 TPM3P06753 285 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 ZNF132P52740 706 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 UBASH3AP57075 661 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 BPIFB4P59827 614 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 ZNF445P59923 1031 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 POLR2FP61218 127 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 CYP4F8P98187 520 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 FANCCQ00597 558 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 DRAP1Q14919 205 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 CNGA2Q16280 664 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 APTXQ7Z2E3 356 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 CACNA2D4Q7Z3S7 1137 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 PDZD8Q8NEN9 1154 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 FBXO32Q969P5 355 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 SPAG5Q96R06 1193 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 STK33Q9BYT3 514 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 TASP1Q9H6P5 420 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 IL21Q9HBE4 155 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 TRPC7Q9HCX4 862 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 RTN4Q9NQC3 1192 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 FHOD1Q9Y613 1164 aa12.77□□□□□ -0.37
CSNK1E-213ENST00000495232 TNFRSF10AO00220 468 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 O00370 1275 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 FOXN3O00409 490 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 XPO1O14980 1071 aaKnown RBP12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 CYP26A1O43174 497 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 MOSPD3O75425 235 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 AVPR1AP37288 418 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 KLK7P49862 253 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 PDE6CP51160 858 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 USP46P62068 366 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 TAF10Q12962 218 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 MAB21L3Q8N8X9 362 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 RNF214Q8ND24 703 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 ZMIZ2Q8NF64 920 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 SCAMP5Q8TAC9 235 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms