RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 FUBP3Q96I24 572 aaKnown RBP eCLIP11.62□□□□□ -0.55
PKP4-215ENST00000494945 ZBED2Q9BTP6 218 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 HERC2P3Q9BVR0 1158 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 TLR10Q9BXR5 811 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 PNPLA8Q9NP80 782 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 CXXC1Q9P0U4 656 aaPredicted RBP11.62□□□□□ -0.55
PKP4-215ENST00000494945 TJP2Q9UDY2 1190 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 CHORDC1Q9UHD1 332 aaPredicted RBP11.62□□□□□ -0.55
PKP4-215ENST00000494945 IP6K2Q9UHH9 426 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 SNX12Q9UMY4 172 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 HYOU1Q9Y4L1 999 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 PCDHB12Q9Y5F1 795 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 SAR1BQ9Y6B6 198 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 CEP290O15078 2479 aa11.62□□□□□ -0.55
PKP4-215ENST00000494945 MIF4GDA9UHW6 222 aaKnown RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 GOLGA8SH3BPF8 625 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 TBC1D4O60343 1298 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 PROSCO94903 275 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 SOD2P04179 222 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 KRT3P12035 628 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 TCP1P17987 556 aaKnown RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 SLC1A1P43005 524 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 MAP3K7CLP57077 242 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 AMPD2Q01433 879 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 SLC6A3Q01959 620 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 RPS6KA1Q15418 735 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 CFAP221Q4G0U5 840 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 SLC39A12Q504Y0 691 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 FAM102AQ5T9C2 384 aaPredicted RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 RASIP1Q5U651 963 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 OR6B2Q6IFH4 312 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 FAM183BPQ6ZVS7 135 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 DDX53Q86TM3 631 aaKnown RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 PIGZQ86VD9 579 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 SPATA2LQ8IUW3 424 aaPredicted RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 FNIP1Q8TF40 1166 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 C2orf15Q8WU43 125 aaKnown RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 PIK3R5Q8WYR1 880 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 CLP1Q92989 425 aaKnown RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 HES6Q96HZ4 224 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 MCEEQ96PE7 176 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 TMEM209Q96SK2 561 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 RAD9AQ99638 391 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 SMOQ99835 787 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 VN1R3Q9BXE9 311 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 L2HGDHQ9H9P8 463 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 LRRC4Q9HBW1 653 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 DMAP1Q9NPF5 467 aaPredicted RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 CHST7Q9NS84 486 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 TMLHEQ9NVH6 421 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 MTRRQ9UBK8 725 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 CDC23Q9UJX2 597 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 NR2E3Q9Y5X4 410 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 BACE2Q9Y5Z0 518 aa11.61□□□□□ -0.55
PKP4-215ENST00000494945 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
PKP4-215ENST00000494945 CCDC85CA6NKD9 419 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 TMEM110-MUSTN1A8MSY1 372 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 CES2O00748 559 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 PAPSS1O43252 624 aaPredicted RBP11.6□□□□□ -0.55
PKP4-215ENST00000494945 NCK2O43639 380 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 GABBR2O75899 941 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 BEST1O76090 585 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 FBXO21O94952 628 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
PKP4-215ENST00000494945 COMTP21964 271 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 BDNFP23560 247 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 MAGEA11P43364 429 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 GLUD2P49448 558 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 RPL7AP62424 266 aaKnown RBP11.6□□□□□ -0.55
PKP4-215ENST00000494945 GPR17Q13304 367 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 PIGHQ14442 188 aaPredicted RBP11.6□□□□□ -0.55
PKP4-215ENST00000494945 PSMD5Q16401 504 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 RAB41Q5JT25 222 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 COL13A1Q5TAT6 717 aaPredicted RBP11.6□□□□□ -0.55
PKP4-215ENST00000494945 KIAA1841Q6NSI8 718 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 OLFML1Q6UWY5 402 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 VSTM1Q6UX27 236 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 SLC26A9Q7LBE3 791 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 ARCQ7LC44 396 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 TAS1R1Q7RTX1 841 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 GPR65Q8IYL9 337 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 NIPA2Q8N8Q9 360 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 ZMIZ2Q8NF64 920 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 BTBD6Q96KE9 485 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 B3GALT6Q96L58 329 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 GOLPH3Q9H4A6 298 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 METTL5Q9NRN9 209 aaKnown RBP11.6□□□□□ -0.55
PKP4-215ENST00000494945 PCDHB5Q9Y5E4 795 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 MRFAP1Q9Y605 127 aa11.6□□□□□ -0.55
PKP4-215ENST00000494945 HELZP42694 1942 aaKnown RBP11.6□□□□□ -0.55
PKP4-215ENST00000494945 CCDC66A2RUB6 948 aa11.59□□□□□ -0.55
PKP4-215ENST00000494945 HHLA1C9JL84 531 aa11.59□□□□□ -0.55
PKP4-215ENST00000494945 PIK3R2O00459 728 aa11.59□□□□□ -0.55
PKP4-215ENST00000494945 TRIM66O15016 1216 aa11.59□□□□□ -0.55
PKP4-215ENST00000494945 SART1O43290 800 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms