RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 SNTG2Q9NY99 539 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 PARP2Q9UGN5 583 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 CYTH4Q9UIA0 394 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 SQORQ9Y6N5 450 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 CDH23Q9H251 3354 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 PPFIA2O75334 1257 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 DARSP14868 501 aaKnown RBP16.43■□□□□ 0.22
SHISA5-216ENST00000494854 MYOGP15173 224 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 INCA1Q0VD86 236 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 SNX1Q13596 522 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 PIGHQ14442 188 aaPredicted RBP16.43■□□□□ 0.22
SHISA5-216ENST00000494854 PPP1R7Q15435 360 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 SPDYCQ5MJ68 293 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 HEMGNQ9BXL5 484 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 EIF2AQ9BY44 585 aaKnown RBP16.43■□□□□ 0.22
SHISA5-216ENST00000494854 TXLNGYQ9BZA5 131 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 OSBPL8Q9BZF1 889 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 OSBPL7Q9BZF2 842 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 DCLK3Q9C098 648 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 FAM124BQ9H5Z6 455 aaPredicted RBP16.43■□□□□ 0.22
SHISA5-216ENST00000494854 BARX2Q9UMQ3 279 aaPredicted RBP16.43■□□□□ 0.22
SHISA5-216ENST00000494854 DERAQ9Y315 318 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 NFS1Q9Y697 457 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 ERICH4A6NGS2 130 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 F8VP50 259 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 MICAL2O94851 1124 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 GJB5O95377 273 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 VDRP11473 427 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 DEFB103AP81534 67 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
SHISA5-216ENST00000494854 CEP85LQ5SZL2 805 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 PPP2R2DQ66LE6 453 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
SHISA5-216ENST00000494854 TTC39CQ8N584 583 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 NIPA2Q8N8Q9 360 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 ATG4AQ8WYN0 398 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 SNX27Q96L92 541 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 HOMER3Q9NSC5 361 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 TJP2Q9UDY2 1190 aa16.42■□□□□ 0.22
SHISA5-216ENST00000494854 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHISA5-216ENST00000494854 GOLGA8SH3BPF8 625 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 CA3P07451 260 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 FOSL2P15408 326 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 TCF4P15884 667 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 CETN2P41208 172 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 GSCP56915 257 aaPredicted RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 KRT17Q04695 432 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 MYO1EQ12965 1108 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 LRRC38Q5VT99 294 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 RCOR2Q8IZ40 523 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 GRK7Q8WTQ7 553 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 RBM41Q96IZ5 413 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 HEXIM2Q96MH2 286 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 CPXM1Q96SM3 734 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 RAD9AQ99638 391 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 CXCL16Q9H2A7 254 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 WDR35Q9P2L0 1181 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 MTRF1LQ9UGC7 380 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 ATP8A1Q9Y2Q0 1164 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 CDY2AQ9Y6F7 541 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 SIGLEC16A6NMB1 481 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 M0QYV0 167 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 TLL1O43897 1013 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 AMHP03971 560 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 KRT3P12035 628 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 NDST1P52848 882 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 PSMC1P62191 440 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 NFX1Q12986 1120 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 LPIN1Q14693 890 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 CNGA2Q16280 664 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 ATP13A4Q4VNC1 1196 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 FBXO47Q5MNV8 452 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 KCTD16Q68DU8 428 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 SYDE1Q6ZW31 735 aaPredicted RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 OR2W6PQ8NHA6 318 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 ZMAT2Q96NC0 199 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 SYNCQ9H7C4 482 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 KLHL11Q9NVR0 708 aa16.41■□□□□ 0.22
SHISA5-216ENST00000494854 R3HDM2Q9Y2K5 976 aaKnown RBP16.41■□□□□ 0.22
SHISA5-216ENST00000494854 CHD7Q9P2D1 2997 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 GOLGA6L10A6NI86 522 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 KRT1P04264 644 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 AXLP30530 894 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 RFC1P35251 1148 aaPredicted RBP16.4■□□□□ 0.22
SHISA5-216ENST00000494854 CCNG2Q16589 344 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 ZFYVE27Q5T4F4 411 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.4■□□□□ 0.229e-8■□□□□ 9
SHISA5-216ENST00000494854 ANKS1BQ7Z6G8 1248 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 ATL2Q8NHH9 583 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 ART4Q93070 314 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 ATP6V1G3Q96LB4 118 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 SLITRK1Q96PX8 696 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 GAS2L1Q99501 681 aaPredicted RBP16.4■□□□□ 0.22
SHISA5-216ENST00000494854 ZBED2Q9BTP6 218 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 FAM129AQ9BZQ8 928 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 PRDM12Q9H4Q4 367 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms