RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 A0A0U1RQF3 1178 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 ARL5CA6NH57 179 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 GOLGA8SH3BPF8 625 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 RFC1P35251 1148 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 AGMOQ6ZNB7 445 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 CCDC13Q8IYE1 715 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 SLC43A3Q8NBI5 491 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 SLC12A6Q9UHW9 1150 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 CAPN15O75808 1086 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 PFKMP08237 780 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 SKIP12755 728 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 WARSP23381 471 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 ZNF618Q5T7W0 954 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 DAB2IPQ5VWQ8 1189 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 ADGRF2Q8IZF7 708 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 ZDHHC14Q8IZN3 488 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 ZNF784Q8NCA9 323 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 STK32AQ8WU08 396 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 SEC14L1Q92503 715 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 OSBPL7Q9BZF2 842 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 PPANQ9NQ55 473 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 PCYOX1Q9UHG3 505 aa19.47■□□□□ 0.71
TSPAN4-212ENST00000494815 A0A1W2PQ45 241 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 A0A1W2PQY0 241 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 FAM187AA6NFU0 413 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 F8VP50 259 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 FGFR1P11362 822 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 SNX16P57768 344 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 DR1Q01658 176 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 ZNF844Q08AG5 666 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 SIX1Q15475 284 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 TTC30AQ86WT1 665 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 C12orf50Q8NA57 414 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 LPPQ93052 612 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 TNIP3Q96KP6 325 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 CENPHQ9H3R5 247 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 ACTR5Q9H9F9 607 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 GMNCA6NCL1 334 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 TTI1O43156 1089 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 MGEA5O60502 916 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 RASSF9O75901 435 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 SSR1P43307 286 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 AGBL2Q5U5Z8 902 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 MAGOHBQ96A72 148 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 PGBD4Q96DM1 585 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 RAB17Q9H0T7 212 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 CXorf56Q9H5V9 222 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 UBN1Q9NPG3 1134 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 STARD7Q9NQZ5 370 aa19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 METTL5Q9NRN9 209 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 UTP11Q9Y3A2 253 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-212ENST00000494815 TCRBV7S2A1N4TA0A589 114 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 TRAPPC3O43617 180 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 RARAP10276 462 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 CKBP12277 381 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 PSMA2P25787 234 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 RPL9P32969 192 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 CETN2P41208 172 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 MTMR3Q13615 1198 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 ACAP1Q15027 740 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 CCDC121Q6ZUS5 278 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 POLNQ7Z5Q5 900 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 JOSD2Q8TAC2 188 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 SLC35F5Q8WV83 523 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 RBM41Q96IZ5 413 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 ADAM2Q99965 735 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 SLC4A5Q9BY07 1137 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 DPEP3Q9H4B8 488 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 KLC4Q9NSK0 619 aa19.45■□□□□ 0.7
TSPAN4-212ENST00000494815 CHUKO15111 745 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 TMEM110Q86TL2 294 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 RCOR2Q8IZ40 523 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 ANKRD52Q8NB46 1076 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 OR2W6PQ8NHA6 318 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 SEZ6LQ9BYH1 1024 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 LRRC19Q9H756 370 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 RSAD1Q9HA92 442 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 PHF24Q9UPV7 400 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 E5RJQ4 531 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 CYB561D2O14569 222 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 PDGFRBP09619 1106 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 LMO2P25791 158 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 SCNN1GP51170 649 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 BCAT1P54687 386 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 FAM102AQ5T9C2 384 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 CCDC50Q8IVM0 306 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 TRPV6Q9H1D0 765 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 NEUROG2Q9H2A3 272 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 DDX56Q9NY93 547 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 RASAL2Q9UJF2 1139 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 PTCH2Q9Y6C5 1203 aa19.44■□□□□ 0.7
TSPAN4-212ENST00000494815 PODXLO00592 558 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 AFF1P51825 1210 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 COPS2P61201 443 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 PPP2R2AP63151 447 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 BST2Q10589 180 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 PMF1Q6P1K2 205 aa19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 CCDC137Q6PK04 289 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-212ENST00000494815 DDX42Q86XP3 938 aaKnown RBP eCLIP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms