RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 DGKEP52429 567 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 MYO1EQ12965 1108 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 TP53BP2Q13625 1128 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 ZIK1Q3SY52 487 aaPredicted RBP3.3□□□□□ -1.88
LRIF1-203ENST00000494675 VPS53Q5VIR6 699 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 ICE2Q659A1 982 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 RGS7BPQ6MZT1 257 aaPredicted RBP3.3□□□□□ -1.88
LRIF1-203ENST00000494675 KCNV1Q6PIU1 500 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 CATSPERGQ6ZRH7 1159 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 SYTL1Q8IYJ3 562 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 SPARTQ8N0X7 666 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 FANCBQ8NB91 859 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 SLC30A5Q8TAD4 765 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 PROKR1Q8TCW9 393 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 OSBPL9Q96SU4 736 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 EIF2AQ9BY44 585 aaKnown RBP3.3□□□□□ -1.88
LRIF1-203ENST00000494675 HEYLQ9NQ87 328 aaPredicted RBP3.3□□□□□ -1.88
LRIF1-203ENST00000494675 TRMT13Q9NUP7 481 aaKnown RBP3.3□□□□□ -1.88
LRIF1-203ENST00000494675 ANKFY1Q9P2R3 1169 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 ZNHIT2Q9UHR6 403 aa3.3□□□□□ -1.88
LRIF1-203ENST00000494675 MAGED2Q9UNF1 606 aaPredicted RBP3.3□□□□□ -1.88
LRIF1-203ENST00000494675 COL4A3Q01955 1670 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 CENPVL1A0A0U1RR11 272 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 AQP7P3A6NL99 342 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 RRP9O43818 475 aaKnown RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 A1BGP04217 495 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 ITGAMP11215 1152 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 MYL4P12829 197 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 IDEP14735 1019 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 KCNA3P22001 575 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 PPIFP30405 207 aaKnown RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 TECP42680 631 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 HSPA7P48741 367 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 STARD3Q14849 445 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 NPY5RQ15761 445 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 SLC35G1Q2M3R5 365 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 PLAG1Q6DJT9 500 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 FBXO38Q6PIJ6 1188 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 RHOUQ7L0Q8 258 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 KCTD20Q7Z5Y7 419 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 ARHGEF19Q8IW93 802 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 SLC15A3Q8IY34 581 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 VGLL2Q8N8G2 317 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 B3GALNT2Q8NCR0 500 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 POF1BQ8WVV4 589 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 FAM136AQ96C01 138 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 CRB3Q9BUF7 120 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 ACTRT3Q9BYD9 372 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 WDR12Q9GZL7 423 aaKnown RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 DHX36Q9H2U1 1008 aaKnown RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 CXorf36Q9H7Y0 433 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 CASS4Q9NQ75 786 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 DKK2Q9UBU2 259 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 SERTAD3Q9UJW9 196 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 NDRG4Q9ULP0 352 aaKnown RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 CDY1Q9Y6F8 540 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 ADAMTS3O15072 1205 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 SRGAP2O75044 1071 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 PIAS2O75928 621 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 PPP3CBP16298 524 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 PRKAR1BP31321 381 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 TNFAIP2Q03169 654 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 MPEG1Q2M385 716 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 GORABQ5T7V8 394 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 FCRL6Q6DN72 434 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 GPR149Q86SP6 731 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 ZNF527Q8NB42 609 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 TOR1AIP2Q8NFQ8 470 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 SSH3Q8TE77 659 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 VOPP1Q96AW1 172 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 POLR3GLQ9BT43 218 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 AMBRA1Q9C0C7 1298 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 FAM83DQ9H4H8 585 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 SERHL2Q9H4I8 314 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 MYH16Q9H6N6 1097 aa3.29□□□□□ -1.88
LRIF1-203ENST00000494675 GBA2Q9HCG7 927 aaPredicted RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 DNMT3BQ9UBC3 853 aaKnown RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 RGS17Q9UGC6 210 aaPredicted RBP3.29□□□□□ -1.88
LRIF1-203ENST00000494675 POLR2AP24928 1970 aaKnown RBP3.28□□□□□ -1.88
LRIF1-203ENST00000494675 IFRD1O00458 451 aaPredicted RBP3.28□□□□□ -1.88
LRIF1-203ENST00000494675 PODXLO00592 558 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 HNRNPDLO14979 420 aaKnown RBP3.28□□□□□ -1.88
LRIF1-203ENST00000494675 PPM1DO15297 605 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 PLA2G6O60733 806 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 NDST3O95803 873 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 KRT4P19013 534 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 IL6STP40189 918 aaPredicted RBP3.28□□□□□ -1.88
LRIF1-203ENST00000494675 ITIH3Q06033 890 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 TRIM14Q14142 442 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 KCNAB1Q14722 419 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 SF3B3Q15393 1217 aaKnown RBP3.28□□□□□ -1.88
LRIF1-203ENST00000494675 PTCHD3Q3KNS1 767 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 GRAMD1BQ3KR37 738 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 FAM83BQ5T0W9 1011 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 DEPDC1Q5TB30 811 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 STRIP1Q5VSL9 837 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 ABHD17BQ5VST6 288 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 PGBD2Q6P3X8 592 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 GGT6Q6P531 493 aa3.28□□□□□ -1.88
LRIF1-203ENST00000494675 TSHZ1Q6ZSZ6 1077 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms