RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 RETREG1Q9H6L5 497 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 TXLNGQ9NUQ3 528 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 CLIC5Q9NZA1 410 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 ZIM2Q9NZV7 527 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 LUZP4Q9P127 313 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 DKK3Q9UBP4 350 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 ICKQ9UPZ9 632 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 RABGAP1Q9Y3P9 1069 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 GPR45Q9Y5Y3 372 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 WASHC2AQ641Q2 1341 aa2.63□□□□□ -1.99
PTPN12-212ENST00000494248 DYTNA2CJ06 578 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 QSOX1O00391 747 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 POLRMTO00411 1230 aaKnown RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 NTN3O00634 580 aaPredicted RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 AKAP10O43572 662 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SOAT2O75908 522 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SBK3P0C264 359 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 OSMP13725 252 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SCP2P22307 547 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 PPM1FP49593 454 aaPredicted RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 RAB27AP51159 221 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 NEK2P51955 445 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SLC16A1P53985 500 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 GEMIN4P57678 1058 aaKnown RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 TBCCQ15814 346 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 CLUL1Q15846 466 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 LONRF1Q17RB8 773 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 GFOD2Q3B7J2 385 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 ALDH1L2Q3SY69 923 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 FLYWCH1Q4VC44 716 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 CCDC92Q53HC0 331 aaPredicted RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 FAM133BQ5BKY9 247 aaKnown RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 AARS2Q5JTZ9 985 aaKnown RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 C1QTNF12Q5T7M4 302 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 TEDDM1Q5T9Z0 273 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 PPP4R3AQ6IN85 833 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 FBXL22Q6P050 247 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 PDXDC1Q6P996 788 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 NPNTQ6UXI9 565 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SLC30A10Q6XR72 485 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 STRA8Q7Z7C7 330 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 RNF180Q86T96 592 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 DGKHQ86XP1 1220 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SUGP1Q8IWZ8 645 aaKnown RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 TCEAL8Q8IYN2 117 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 FAM109AQ8N4B1 249 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 ANKRD42Q8N9B4 389 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 C8orf58Q8NAV2 365 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 TMIEQ8NEW7 156 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 IFI44Q8TCB0 444 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 TMEM255BQ8WV15 326 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 NRG4Q8WWG1 115 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 ATRIPQ8WXE1 791 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SSH1Q8WYL5 1049 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 HDAC10Q969S8 669 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 C5orf34Q96MH7 638 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SLC2A13Q96QE2 648 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 HERPUD2Q9BSE4 406 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 FAM126AQ9BYI3 521 aaPredicted RBP2.62□□□□□ -1.99
PTPN12-212ENST00000494248 AMBRA1Q9C0C7 1298 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 SIK2Q9H0K1 926 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 ARHGEF3Q9NR81 526 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 PCDHA13Q9Y5I0 950 aa2.62□□□□□ -1.99
PTPN12-212ENST00000494248 A0A1W2PRQ8 180 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 E9PLN8 166 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 DNAJB5O75953 348 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 RPN1P04843 607 aaKnown RBP2.61□□□□□ -1.99
PTPN12-212ENST00000494248 NBPF7P0C2Y1 421 aaPredicted RBP2.61□□□□□ -1.99
PTPN12-212ENST00000494248 PRF1P14222 555 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 TRIM27P14373 513 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 ITGALP20701 1170 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 SMARCA1P28370 1054 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 NDUFV1P49821 464 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 GUCY2FP51841 1108 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 TMPRSS15P98073 1019 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 CDC42EP1Q00587 391 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 TARDBPQ13148 414 aaKnown RBP eCLIP2.61□□□□□ -1.99
PTPN12-212ENST00000494248 PICALMQ13492 652 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 PIN1Q13526 163 aaPredicted RBP2.61□□□□□ -1.99
PTPN12-212ENST00000494248 STAT4Q14765 748 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 RAB39AQ14964 217 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 MLC1Q15049 377 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 PUM3Q15397 648 aaKnown RBP2.61□□□□□ -1.99
PTPN12-212ENST00000494248 KRT71Q3SY84 523 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 ZNF618Q5T7W0 954 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 FAM102BQ5T8I3 360 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 ANO1Q5XXA6 986 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 GSG1LQ6UXU4 331 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 MMS22LQ6ZRQ5 1243 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 CHSY1Q86X52 802 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 ZNF354CQ86Y25 554 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 DCP1BQ8IZD4 617 aaKnown RBP2.61□□□□□ -1.99
PTPN12-212ENST00000494248 ATL2Q8NHH9 583 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 PRSS3P2Q8NHM4 247 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 SKA1Q96BD8 255 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 COQ8BQ96D53 544 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 MPP4Q96JB8 637 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 CLPTM1LQ96KA5 538 aa2.61□□□□□ -1.99
PTPN12-212ENST00000494248 VKORC1Q9BQB6 163 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms