RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CEP85Q6P2H3 762 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 ZNF627Q7L945 461 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 SESTD1Q86VW0 696 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 VRK3Q8IV63 474 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 LRRC71Q8N4P6 559 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 CCDC150Q8NCX0 1101 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 RP9Q8TA86 221 aaKnown RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 SLC30A5Q8TAD4 765 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 MYCBPAPQ8TBZ2 947 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 PNISRQ8TF01 805 aaKnown RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 OSCP1Q8WVF1 389 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 MAML1Q92585 1016 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 TBC1D5Q92609 795 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 MSLNLQ96KJ4 702 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 HAPLN3Q96S86 360 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 ARPC5LQ9BPX5 153 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 UNKQ9C0B0 810 aaKnown RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 MS4A7Q9GZW8 240 aaPredicted RBP2.86□□□□□ -1.95
LMNB1-207ENST00000494185 IKZF4Q9H2S9 585 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 SMOC2Q9H3U7 446 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 ARHGEF3Q9NR81 526 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 PTGFRNQ9P2B2 879 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 CORO2BQ9UQ03 480 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 ENTPD2Q9Y5L3 495 aa2.86□□□□□ -1.95
LMNB1-207ENST00000494185 UBE2Q2LH0YL09 131 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 PYCARD-AS1I3L0S3 204 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 M0R3H8 397 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 DCLK1O15075 740 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 SNX2O60749 519 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 RNF8O76064 485 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 IL18RAPO95256 599 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 MYL3P08590 195 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 SLC5A1P13866 664 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 RARRES1P49788 294 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 CCT8P50990 548 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 ZNF134P52741 427 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 PDE1AP54750 535 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 SCAPQ12770 1279 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 SLC29A2Q14542 456 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 TBCCQ15814 346 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 GRAMD1BQ3KR37 738 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 PRR16Q569H4 304 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 DCAF12L1Q5VU92 463 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 IL31Q6EBC2 164 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 RGS7BPQ6MZT1 257 aaPredicted RBP2.85□□□□□ -1.95
LMNB1-207ENST00000494185 SYCE2Q6PIF2 218 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 OLFML1Q6UWY5 402 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 TOGARAM2Q6ZUX3 1019 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 BEND5Q7L4P6 421 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 RD3Q7Z3Z2 195 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 PEG10Q86TG7 708 aaKnown RBP2.85□□□□□ -1.95
LMNB1-207ENST00000494185 DTX2Q86UW9 622 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 MICU3Q86XE3 530 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 GAS2L3Q86XJ1 694 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 ADGRG3Q86Y34 549 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 PPM1EQ8WY54 764 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 RAPGEF4Q8WZA2 1011 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 GJA10Q969M2 543 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 ELAC2Q9BQ52 826 aaKnown RBP2.85□□□□□ -1.95
LMNB1-207ENST00000494185 MESP1Q9BRJ9 268 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 STK31Q9BXU1 1019 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 MAF1Q9H063 256 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 DHX36Q9H2U1 1008 aaKnown RBP2.85□□□□□ -1.95
LMNB1-207ENST00000494185 PRDM16Q9HAZ2 1276 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 TRIM36Q9NQ86 728 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 COL20A1Q9P218 1284 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 TAGLN3Q9UI15 199 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 ING1Q9UK53 422 aaPredicted RBP2.85□□□□□ -1.95
LMNB1-207ENST00000494185 USP22Q9UPT9 525 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.85□□□□□ -1.95
LMNB1-207ENST00000494185 EPN1Q9Y6I3 576 aaPredicted RBP2.85□□□□□ -1.95
LMNB1-207ENST00000494185 SPATA31A6Q5VVP1 1343 aa2.85□□□□□ -1.95
LMNB1-207ENST00000494185 TMEM233B4DJY2 109 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 KPNA5O15131 536 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 USP12O75317 370 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 JTBO76095 146 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 RASAL1O95294 804 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 FGAP02671 866 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 PARP1P09874 1014 aaKnown RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TPH1P17752 444 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 WT1P19544 449 aaPredicted RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 LIPAP38571 399 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 MPLP40238 635 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 PIK3CBP42338 1070 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 CASP5P51878 434 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 NEK3P51956 506 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 AK2P54819 239 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 BTKQ06187 659 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 SLC10A2Q12908 348 aaPredicted RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 RAPGEF1Q13905 1077 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 CCNIQ14094 377 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 DAG1Q14118 895 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 RALBP1Q15311 655 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 ST3GAL2Q16842 350 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TXNRD1Q16881 649 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 LONRF1Q17RB8 773 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TMEM95Q3KNT9 176 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 PLA1AQ53H76 456 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 AARS2Q5JTZ9 985 aaKnown RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 C10orf62Q5T681 223 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms