RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 CACTINQ8WUQ7 758 aaKnown RBP8.14□□□□□ -1.11
RBM39-238ENST00000493853 DEPDC1BQ8WUY9 529 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 ATRIPQ8WXE1 791 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 DNASE1L2Q92874 299 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 KCNN1Q92952 543 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 HVCN1Q96D96 273 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 ASB16Q96NS5 453 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 ACCSQ96QU6 501 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 PYM1Q9BRP8 204 aaKnown RBP8.14□□□□□ -1.11
RBM39-238ENST00000493853 DDX23Q9BUQ8 820 aaKnown RBP8.14□□□□□ -1.11
RBM39-238ENST00000493853 ATXN3LQ9H3M9 355 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 ZSCAN16Q9H4T2 348 aaPredicted RBP8.14□□□□□ -1.11
RBM39-238ENST00000493853 TBC1D7Q9P0N9 293 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 DLGAP2Q9P1A6 1054 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 SEL1LQ9UBV2 794 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 NDRG2Q9UN36 371 aaKnown RBP8.14□□□□□ -1.11
RBM39-238ENST00000493853 C2CD2Q9Y426 696 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 YIPF1Q9Y548 306 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 ASB3Q9Y575 518 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 ZNF318Q5VUA4 2279 aa8.14□□□□□ -1.11
RBM39-238ENST00000493853 TDRD15B5MCY1 1934 aaKnown RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 PPEF2O14830 753 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 RGS9O75916 674 aaPredicted RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 HSP90AA1P07900 732 aaKnown RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 NFICP08651 508 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 GLULP15104 373 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 VIPR2P41587 438 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 CCR2P41597 374 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 STAT6P42226 847 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 AARSP49588 968 aaKnown RBP eCLIP8.13□□□□□ -1.11
RBM39-238ENST00000493853 TAF6P49848 677 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 KPNA1P52294 538 aaPredicted RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 TFAMQ00059 246 aaKnown RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 POU5F1Q01860 360 aaKnown RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 SMARCB1Q12824 385 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 ALCAMQ13740 583 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 MGAT5BQ3V5L5 792 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 SV2CQ496J9 727 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 SLC39A12Q504Y0 691 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 CENPPQ6IPU0 288 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 SLC39A4Q6P5W5 647 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 STXBP4Q6ZWJ1 553 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 USP49Q70CQ1 688 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 DNAJB7Q7Z6W7 309 aaPredicted RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 NT5DC4Q86YG4 428 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 MFSD6LQ8IWD5 586 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 ETFBKMTQ8IXQ9 262 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 DCP1BQ8IZD4 617 aaKnown RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 TMEM130Q8N3G9 435 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 LRRC15Q8TF66 581 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 SECISBP2LQ93073 1101 aaKnown RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 BORCS6Q96GS4 357 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 ZSWIM3Q96MP5 696 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 CLIC6Q96NY7 704 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 GCNAQ96QF7 691 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 SEPT5Q99719 369 aaPredicted RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 LRRC27Q9C0I9 530 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 ST6GALNAC4Q9H4F1 302 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 ZNF334Q9HCZ1 680 aaPredicted RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 FBXO2Q9UK22 296 aaPredicted RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 NAGPAQ9UK23 515 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 FBXO4Q9UKT5 387 aa8.13□□□□□ -1.11
RBM39-238ENST00000493853 MTF2Q9Y483 593 aaPredicted RBP8.13□□□□□ -1.11
RBM39-238ENST00000493853 MYO10Q9HD67 2058 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 ANO9A1A5B4 782 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 MTMR11A4FU01 709 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 HEPACAM2A8MVW5 462 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 KPNA7A9QM74 516 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 TISP43B9A030 160 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PIRO00625 290 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 FAM189A1O60320 539 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 HUS1O60921 280 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 CYP11A1P05108 521 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 GABRR2P28476 465 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PNPLA4P41247 253 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 RPS9P46781 194 aaKnown RBP8.12□□□□□ -1.11
RBM39-238ENST00000493853 ID4P47928 161 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 CDR1P51861 262 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 EPHA5P54756 1037 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 AMPD3Q01432 767 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 TSPY1Q01534 308 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 RESTQ13127 1097 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 SLC39A14Q15043 492 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 STK38Q15208 465 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PTPAQ15257 358 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 ZNF528Q3MIS6 628 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 L1TD1Q5T7N2 865 aaKnown RBP8.12□□□□□ -1.11
RBM39-238ENST00000493853 GPR158Q5T848 1215 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 WSCD1Q658N2 575 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 FAM173BQ6P4H8 233 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 VITQ6UXI7 678 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 CCDC65Q8IXS2 484 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PDILTQ8N807 584 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 SHKBP1Q8TBC3 707 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 FAM3CQ92520 227 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 RUBCNQ92622 972 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PSMG2Q969U7 264 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
RBM39-238ENST00000493853 ZNF560Q96MR9 790 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 ZNF396Q96N95 335 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms