RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 NFATC1O95644 943 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 PFKLP17858 780 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 TCEAL6Q6IPX3 200 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 DENND5BQ6ZUT9 1274 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 WDR49Q8IV35 697 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 MYCBPAPQ8TBZ2 947 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 USP33Q8TEY7 942 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 TCEAL3Q969E4 200 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 PCED1BQ96HM7 432 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 MMS19Q96T76 1030 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 KIAA1586Q9HCI6 787 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 TRPM5Q9NZQ8 1165 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 MTMR6Q9Y217 621 aa18.56■□□□□ 0.56
COL9A1-210ENST00000493682 ZNF840PA6NDX5 716 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 K7EQS6 105 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 LEFTY2O00292 366 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 ANXA13P27216 316 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 PMLP29590 882 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 OPRD1P41143 372 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 DGKEP52429 567 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 CREB5Q02930 508 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 GAB4Q2WGN9 574 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 TRAPPC11Q7Z392 1133 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 TSTD1Q8NFU3 115 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 CCDC26Q8TAB7 109 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 MRPL45Q9BRJ2 306 aaKnown RBP18.55■□□□□ 0.56
COL9A1-210ENST00000493682 TTLL2Q9BWV7 592 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 RNF38Q9H0F5 515 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 TNMDQ9H2S6 317 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 KBTBD4Q9NVX7 518 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 EHD2Q9NZN4 543 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 NME7Q9Y5B8 376 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 KIAA1549LQ6ZVL6 1849 aa18.55■□□□□ 0.56
COL9A1-210ENST00000493682 MYO16Q9Y6X6 1858 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 BCLAF3A2AJT9 711 aaKnown RBP18.54■□□□□ 0.56
COL9A1-210ENST00000493682 ANTXRLA6NF34 631 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 F8VP50 259 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 TRIM66O15016 1216 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 CST3P01034 146 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-210ENST00000493682 GNL1P36915 607 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-210ENST00000493682 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-210ENST00000493682 SEC13P55735 322 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 NOP14P78316 857 aaKnown RBP18.54■□□□□ 0.56
COL9A1-210ENST00000493682 SLC7A9P82251 487 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 E2F4Q16254 413 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 C2orf27AQ580R0 203 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 MDH1BQ5I0G3 518 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 RNF43Q68DV7 783 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 LSM14BQ9BX40 385 aaKnown RBP18.54■□□□□ 0.56
COL9A1-210ENST00000493682 TRIM9Q9C026 710 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 LRRC27Q9C0I9 530 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 SNX25Q9H3E2 840 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 ANGPTL2Q9UKU9 493 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 INVSQ9Y283 1065 aa18.54■□□□□ 0.56
COL9A1-210ENST00000493682 HELZP42694 1942 aaKnown RBP18.54■□□□□ 0.56
COL9A1-210ENST00000493682 EIF3DO15371 548 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL9A1-210ENST00000493682 CAVIN2O95810 425 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 CYP17A1P05093 508 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 DLATP10515 647 aaKnown RBP18.53■□□□□ 0.56
COL9A1-210ENST00000493682 GBP1P32455 592 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 PPP3CCP48454 512 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 STK38Q15208 465 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 SNRNP35Q16560 246 aaKnown RBP18.53■□□□□ 0.56
COL9A1-210ENST00000493682 EPM2AIP1Q7L775 607 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-210ENST00000493682 HS2ST1Q7LGA3 356 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 FILIP1Q7Z7B0 1213 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 KIAA1958Q8N8K9 716 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 LINC00301Q8NCQ3 95 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 ZNF507Q8TCN5 953 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 C8orf48Q96LL4 319 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 TPSD1Q9BZJ3 242 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 ZSCAN16Q9H4T2 348 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-210ENST00000493682 AGPAT3Q9NRZ7 376 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 CPQQ9Y646 472 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 CHD8Q9HCK8 2581 aa18.53■□□□□ 0.56
COL9A1-210ENST00000493682 TGFB1I1O43294 461 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 TACC1O75410 805 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 OLFM2O95897 454 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 ABL1P00519 1130 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 PTPN1P18031 435 aaKnown RBP18.52■□□□□ 0.56
COL9A1-210ENST00000493682 TNNI1P19237 187 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 CACNA2D1P54289 1103 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 ASIC1P78348 528 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 SHC2P98077 582 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 TAF10Q12962 218 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 PSMD6Q15008 389 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 USP39Q53GS9 565 aaKnown RBP18.52■□□□□ 0.56
COL9A1-210ENST00000493682 RASSF3Q86WH2 238 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 ADGRG2Q8IZP9 1017 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 CCDC33Q8N5R6 958 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 OR6B3Q8NGW1 331 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.56
COL9A1-210ENST00000493682 CGRRF1Q99675 332 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 EDEM2Q9BV94 578 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 CUEDC2Q9H467 287 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 TMEM30AQ9NV96 361 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 SMPD4Q9NXE4 827 aa18.52■□□□□ 0.56
COL9A1-210ENST00000493682 MMP17Q9ULZ9 603 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms