RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 FUBP3Q96I24 572 aaKnown RBP eCLIP13.35□□□□□ -0.27
VPS52-220ENST00000493674 B3GALT6Q96L58 329 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 RAD9AQ99638 391 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 NAPGQ99747 312 aaPredicted RBP13.35□□□□□ -0.27
VPS52-220ENST00000493674 SMOQ99835 787 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 MIS12Q9H081 205 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 MRPL47Q9HD33 250 aaKnown RBP13.35□□□□□ -0.27
VPS52-220ENST00000493674 PNPLA8Q9NP80 782 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 SPG21Q9NZD8 308 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 CHORDC1Q9UHD1 332 aaPredicted RBP13.35□□□□□ -0.27
VPS52-220ENST00000493674 JRKLQ9Y4A0 524 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 BACE2Q9Y5Z0 518 aa13.35□□□□□ -0.27
VPS52-220ENST00000493674 CTAGE9A4FU28 777 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 SIGLEC16A6NMB1 481 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
VPS52-220ENST00000493674 VNN2O95498 520 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 ATP1A1P05023 1023 aaKnown RBP13.34□□□□□ -0.27
VPS52-220ENST00000493674 ATP2A2P16615 1042 aaKnown RBP13.34□□□□□ -0.27
VPS52-220ENST00000493674 CASQ1P31415 396 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 MAN1A1P33908 653 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 MAGEA11P43364 429 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 ACADSBP45954 432 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 NOP2P46087 812 aaKnown RBP13.34□□□□□ -0.27
VPS52-220ENST00000493674 DSG1Q02413 1049 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 TAP1Q03518 808 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 NFE2Q16621 373 aaPredicted RBP13.34□□□□□ -0.27
VPS52-220ENST00000493674 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 MEI1Q5TIA1 1274 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 SLC8B1Q6J4K2 584 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 DNAJC24Q6P3W2 148 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 C4orf50Q6ZRC1 276 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 FAM183BPQ6ZVS7 135 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 NT5DC3Q86UY8 548 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 PIGZQ86VD9 579 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 ZDHHC17Q8IUH5 632 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 DCP1BQ8IZD4 617 aaKnown RBP13.34□□□□□ -0.27
VPS52-220ENST00000493674 SYCE1Q8N0S2 351 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 FIBCD1Q8N539 461 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 TLR10Q9BXR5 811 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 TRIM7Q9C029 511 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 STK39Q9UEW8 545 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 DOCK4Q8N1I0 1966 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
VPS52-220ENST00000493674 AP1G2O75843 785 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 OR4Q2P0C623 313 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 RGS7P49802 495 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 SNX16P57768 344 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 RPL7AP62424 266 aaKnown RBP13.33□□□□□ -0.28
VPS52-220ENST00000493674 ADCY1Q08828 1119 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 GPR17Q13304 367 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 PRSS55Q6UWB4 352 aaPredicted RBP13.33□□□□□ -0.28
VPS52-220ENST00000493674 ARCQ7LC44 396 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 SCML4Q8N228 414 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 NIPA2Q8N8Q9 360 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 FEZF2Q8TBJ5 459 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
VPS52-220ENST00000493674 CD101Q93033 1021 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 TMEM169Q96HH4 297 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 PIWIL1Q96J94 861 aaKnown RBP13.33□□□□□ -0.28
VPS52-220ENST00000493674 RNPC3Q96LT9 517 aaKnown RBP13.33□□□□□ -0.28
VPS52-220ENST00000493674 MED10Q9BTT4 135 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 RHOBTB2Q9BYZ6 727 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 GOLPH3Q9H4A6 298 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 L2HGDHQ9H9P8 463 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
VPS52-220ENST00000493674 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 ANAPC7Q9UJX3 599 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 TMEM59LQ9UK28 342 aa13.33□□□□□ -0.28
VPS52-220ENST00000493674 CHD7Q9P2D1 2997 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 MYO7AQ13402 2215 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 LCHNA4D1U4 455 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 LILRB3O75022 631 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 PROSCO94903 275 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 GJB6O95452 261 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 FTCDO95954 541 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 PRLRP16471 622 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 BDNFP23560 247 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 GLUD2P49448 558 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 NAP1L1P55209 391 aaKnown RBP13.32□□□□□ -0.28
VPS52-220ENST00000493674 SLC8A3P57103 927 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 SLC6A3Q01959 620 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 OGDHQ02218 1023 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 SMARCB1Q12824 385 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 PSMD5Q16401 504 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 SLC39A12Q504Y0 691 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 C9orf50Q5SZB4 431 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
VPS52-220ENST00000493674 GPR153Q6NV75 609 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 SLC26A9Q7LBE3 791 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 PHLDB2Q86SQ0 1253 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 DAAM2Q86T65 1068 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 JOSD2Q8TAC2 188 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms