RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ANAPC7Q9UJX3 599 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 SLC4A7Q9Y6M7 1214 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 LAMA3Q16787 3333 aa14.85□□□□□ -0.03
PDZRN3-210ENST00000492909 TCRBV5S1A1TA0A578 114 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 GRXCR1A8MXD5 290 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 E5RJQ4 531 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 XPO1O14980 1071 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 FTCDO95954 541 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 ATP1A1P05023 1023 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 TUBB4BP68371 445 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 HTRA4P83105 476 aaPredicted RBP14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 TAP1Q03518 808 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 MRPL58Q14197 206 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 TERF2Q15554 542 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 CTXN3Q4LDR2 81 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 RASIP1Q5U651 963 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 CC2D1AQ6P1N0 951 aaPredicted RBP14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 CLEC20AQ6ZU45 233 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 PEX26Q7Z412 305 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 TMEM110Q86TL2 294 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 XYLT1Q86Y38 959 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 DCP1BQ8IZD4 617 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 SMARCD1Q96GM5 515 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 B3GALT6Q96L58 329 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 HSFY1Q96LI6 401 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 TMEM209Q96SK2 561 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 SLC9A7Q96T83 725 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 TTPALQ9BTX7 342 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 EPC1Q9H2F5 836 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 MTIF3Q9H2K0 278 aaKnown RBP14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 GOLPH3Q9H4A6 298 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 INSL6Q9Y581 213 aa14.84□□□□□ -0.03
PDZRN3-210ENST00000492909 OR6C75A6NL08 312 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 GOLGA8SH3BPF8 625 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 H7C4K7 107 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 MYO1FO00160 1098 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 AP1G2O75843 785 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 EFEMP2O95967 443 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 ACADSBP45954 432 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 CDR1P51861 262 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 MESDQ14696 234 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 USP41Q3LFD5 358 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 MEI1Q5TIA1 1274 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 PAPD7Q5XG87 772 aaKnown RBP14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 DCUN1D2Q6PH85 259 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 C4orf50Q6ZRC1 276 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 LRRTM3Q86VH5 581 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 SLC39A11Q8N1S5 342 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 COLGALT1Q8NBJ5 622 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 FEZF2Q8TBJ5 459 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 MCRS1Q96EZ8 462 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 TMEM169Q96HH4 297 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 SELENOOQ9BVL4 669 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 PARD6BQ9BYG5 372 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 ZCWPW1Q9H0M4 648 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 AAASQ9NRG9 546 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 TMLHEQ9NVH6 421 aa14.83□□□□□ -0.03
PDZRN3-210ENST00000492909 SIGLEC16A6NMB1 481 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 SEC31AO94979 1220 aaKnown RBP14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 KRT3P12035 628 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 RPL34P49207 117 aaKnown RBP14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 NFE2Q16621 373 aaPredicted RBP14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 RTP2Q5QGT7 225 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 ANKS3Q6ZW76 656 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 TAS1R1Q7RTX1 841 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 NT5DC3Q86UY8 548 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 PIGZQ86VD9 579 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 HERC6Q8IVU3 1022 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 RNF168Q8IYW5 571 aaPredicted RBP14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 PHOSPHO2Q8TCD6 241 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 BTBD6Q96KE9 485 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 MCEEQ96PE7 176 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 TLR10Q9BXR5 811 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 OXCT2Q9BYC2 517 aaPredicted RBP14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 ABCB6Q9NP58 842 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 SPG21Q9NZD8 308 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 AMFRQ9UKV5 643 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 ALG6Q9Y672 507 aa14.83□□□□□ -0.04
PDZRN3-210ENST00000492909 TMEM191CA6NGB0 347 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 TMEM110-MUSTN1A8MSY1 372 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 PIK3R2O00459 728 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 BEST1O76090 585 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 GJB6O95452 261 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 OR4Q2P0C623 313 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 ATP2A2P16615 1042 aaKnown RBP14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 BDNFP23560 247 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 PPM1AP35813 382 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 RABGGTBP53611 331 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 MAP3K7CLP57077 242 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 RPL7AP62424 266 aaKnown RBP14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 BRD3Q15059 726 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 WHAMMP3Q1A5X7 153 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 SLC39A12Q504Y0 691 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 PPP1R15BQ5SWA1 713 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 FAM102AQ5T9C2 384 aaPredicted RBP14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 OR6B2Q6IFH4 312 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 FAM183BPQ6ZVS7 135 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 ZDHHC17Q8IUH5 632 aa14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 SPATA2LQ8IUW3 424 aaPredicted RBP14.82□□□□□ -0.04
PDZRN3-210ENST00000492909 FIBCD1Q8N539 461 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms