RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 CPA6Q8N4T0 437 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 KCTD17Q8N5Z5 321 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 LRRC15Q8TF66 581 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 MRPS31Q92665 395 aaKnown RBP14.09□□□□□ -0.15
HDAC3-213ENST00000492506 CYP2S1Q96SQ9 504 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 PLIN2Q99541 437 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 FUCA2Q9BTY2 467 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 MSTO1Q9BUK6 570 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 TPSD1Q9BZJ3 242 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 KCNF1Q9H3M0 494 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 DUS2Q9NX74 493 aaKnown RBP14.09□□□□□ -0.15
HDAC3-213ENST00000492506 WNT6Q9Y6F9 365 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 ADAMTS20P59510 1910 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 K7EQS6 105 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 NOL4O94818 638 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 CSH1P0DML2 217 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 CSH2P0DML3 217 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 ACOT2P49753 483 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 TAF6P49848 677 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 FAM160A1Q05DH4 1040 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 GNL2Q13823 731 aaKnown RBP14.08□□□□□ -0.16
HDAC3-213ENST00000492506 TMEM119Q4V9L6 283 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 USP39Q53GS9 565 aaKnown RBP14.08□□□□□ -0.16
HDAC3-213ENST00000492506 C11orf74Q86VG3 221 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 DEFB124Q8NES8 71 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 TSTD1Q8NFU3 115 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 OLIG1Q8TAK6 271 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 USP33Q8TEY7 942 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 TRMT2BQ96GJ1 504 aaKnown RBP14.08□□□□□ -0.16
HDAC3-213ENST00000492506 CNOT6LQ96LI5 555 aaKnown RBP14.08□□□□□ -0.16
HDAC3-213ENST00000492506 MYRFLQ96LU7 910 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 FIZ1Q96SL8 496 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 REEP2Q9BRK0 252 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 PI4K2AQ9BTU6 479 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 ASB7Q9H672 318 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 GCNT4Q9P109 453 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 MAGED2Q9UNF1 606 aaPredicted RBP14.08□□□□□ -0.16
HDAC3-213ENST00000492506 LIMCH1Q9UPQ0 1083 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 C2CD2Q9Y426 696 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 PCDHB5Q9Y5E4 795 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 IGSF10Q6WRI0 2623 aa14.08□□□□□ -0.16
HDAC3-213ENST00000492506 GCN1Q92616 2671 aaKnown RBP14.08□□□□□ -0.16
HDAC3-213ENST00000492506 TISP43B9A030 160 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 ANKRD63C9JTQ0 380 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 HNRNPLP14866 589 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDAC3-213ENST00000492506 OPRD1P41143 372 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 ZNF131P52739 623 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 RING1Q06587 406 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 PSMD2Q13200 908 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 DDR2Q16832 855 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 GAB4Q2WGN9 574 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 CYP2U1Q7Z449 544 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 EFCAB13Q8IY85 973 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 DCP1BQ8IZD4 617 aaKnown RBP14.07□□□□□ -0.16
HDAC3-213ENST00000492506 MDGA1Q8NFP4 955 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 GOLGA5Q8TBA6 731 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 LEO1Q8WVC0 666 aaPredicted RBP14.07□□□□□ -0.16
HDAC3-213ENST00000492506 ZCCHC14Q8WYQ9 949 aaKnown RBP14.07□□□□□ -0.16
HDAC3-213ENST00000492506 ATP2A3Q93084 1043 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 EXOC4Q96A65 974 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 PKMYT1Q99640 499 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 SRRTQ9BXP5 876 aaKnown RBP14.07□□□□□ -0.16
HDAC3-213ENST00000492506 LINC00597Q9H2U6 94 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 TMEM206Q9H813 350 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 DPP3Q9NY33 737 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 RSPH14Q9UHP6 348 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 EVLQ9UI08 416 aaPredicted RBP14.07□□□□□ -0.16
HDAC3-213ENST00000492506 ODF2LQ9ULJ1 636 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 NEUROG3Q9Y4Z2 214 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 PCDH15Q96QU1 1955 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 CELSR3Q9NYQ7 3312 aa14.07□□□□□ -0.16
HDAC3-213ENST00000492506 KPNA7A9QM74 516 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 HYAL3O43820 417 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 TCF3P15923 654 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 H2AFXP16104 143 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 SCP2P22307 547 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 CYP2F1P24903 491 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 CALRP27797 417 aaKnown RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 ZXDBP98169 803 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 ATP2C1P98194 919 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 TPD52L1Q16890 204 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 UAP1L1Q3KQV9 507 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 KMT5BQ4FZB7 885 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 ZC2HC1CQ53FD0 456 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 C2orf27AQ580R0 203 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 ANO7Q6IWH7 933 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 CRELD2Q6UXH1 353 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 TACO1Q9BSH4 297 aaKnown RBP14.06□□□□□ -0.16
HDAC3-213ENST00000492506 TMEM74BQ9NUR3 256 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 STYXL1Q9Y6J8 313 aa14.06□□□□□ -0.16
HDAC3-213ENST00000492506 ERICH4A6NGS2 130 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 K7ENM7 598 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 CCP110O43303 1012 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 CAPNS1P04632 268 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 CKMP06732 381 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 USP17L7P0C7H9 530 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 IFNAR2P48551 515 aa14.05□□□□□ -0.16
HDAC3-213ENST00000492506 DHPSP49366 369 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms