RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 HOXA11P31270 313 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RPL9P32969 192 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CDH6P55285 790 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PPARDQ03181 441 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 BMT2Q1RMZ1 405 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ARHGAP15Q53QZ3 475 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 MAP3K21Q5TCX8 1036 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RNF219Q5W0B1 726 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CASC4Q6P4E1 433 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PDZD4Q76G19 769 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CHSY1Q86X52 802 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 FAM131BQ86XD5 332 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CACUL1Q86Y37 369 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 NT5DC4Q86YG4 428 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PGBD3Q8N328 593 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 DNAJC5GQ8N7S2 189 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 B3GALNT2Q8NCR0 500 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 KCNV2Q8TDN2 545 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 MFSD14AQ96MC6 490 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RAD9AQ99638 391 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 OSBPL7Q9BZF2 842 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM7Q9C029 511 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 UPF3AQ9H1J1 476 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 DPEP3Q9H4B8 488 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CYP3A43Q9HB55 503 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ASNSD1Q9NWL6 643 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CXXC1Q9P0U4 656 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 LSM7Q9UK45 103 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 L1RE1Q9UN81 338 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SCINQ9Y6U3 715 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 GOLGA4Q13439 2230 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 IGKV6-21A0A0C4DH24 114 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 FRMD3A2A2Y4 597 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM43BA6NCK2 446 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ZBTB42B2RXF5 422 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 F8VZ95 297 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 NCK2O43639 380 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TSPAN3O60637 253 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PALMO75781 387 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 FGF18O76093 207 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 XPAP23025 273 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ALDH3A1P30838 453 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SLC8A1P32418 973 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CCT5P48643 541 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 BCAT1P54687 386 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 GNGT1P63211 74 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SHHQ15465 462 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 STILQ15468 1287 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TRIP13Q15645 432 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CAPN12Q6ZSI9 719 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 DENND5BQ6ZUT9 1274 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 IRF2BP1Q8IU81 584 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC170Q8IYT3 715 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC89Q8N998 374 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM58Q8NG06 486 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RSAD2Q8WXG1 361 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SMG7Q92540 1137 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 STMN2Q93045 179 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM43Q96BQ3 446 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 MED15Q96RN5 788 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 C11orf84Q9BUA3 381 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RHOBTB2Q9BYZ6 727 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ULBP1Q9BZM6 244 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF518BQ9C0D4 1074 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PRDM12Q9H4Q4 367 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SUDS3Q9H7L9 328 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 KCNK9Q9NPC2 374 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 GPATCH2LQ9NWQ4 482 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 EVPLQ92817 2033 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 DOCK1Q14185 1865 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 MYH9P35579 1960 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 EFCAB8A8MWE9 144 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ATP8B1O43520 1251 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 XYLBO75191 536 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 DDHD2O94830 711 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 MICAL2O94851 1124 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 ASS1P00966 412 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 EDN1P05305 212 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RPSAP08865 295 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RRM1P23921 792 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 YWHAQP27348 245 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 GABRR2P28476 465 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 HOXD13P35453 343 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 NRIP1P48552 1158 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TUFMP49411 452 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SOX4Q06945 474 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 KCNMA1Q12791 1236 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 KCNT1Q5JUK3 1230 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 RARS2Q5T160 578 aaKnown RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PPP1R26Q5T8A7 1209 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 TPGS1Q6ZTW0 290 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 GET4Q7L5D6 327 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 EPM2AIP1Q7L775 607 aaPredicted RBP4.7□□□□□ -1.66
TRA2B-215ENST00000492417 KDELC2Q7Z4H8 507 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 PIGZQ86VD9 579 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 VSIG1Q86XK7 387 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 SLC9A9Q8IVB4 645 aa4.7□□□□□ -1.66
TRA2B-215ENST00000492417 C12orf76Q8N812 135 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms