RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MYO1EQ12965 1108 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 CA9Q16790 459 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 GOLGA7BQ2TAP0 167 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 PPP1R26Q5T8A7 1209 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-220ENST00000492280 RXFP2Q8WXD0 754 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 RSAD2Q8WXG1 361 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 MPHOSPH6Q99547 160 aaKnown RBP13.05□□□□□ -0.32
HMGN1-220ENST00000492280 DPEP3Q9H4B8 488 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 EURLQ9NYK6 297 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 CACNG4Q9UBN1 327 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 H3BRB1 525 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 RBP3P10745 1247 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 AKAP5P24588 427 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 MNAT1P51948 309 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 EIF3EP60228 445 aaKnown RBP13.05□□□□□ -0.32
HMGN1-220ENST00000492280 SURF1Q15526 300 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 HIF1AQ16665 826 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 IGDCC3Q8IVU1 814 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 SCUBE3Q8IX30 993 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 C7orf31Q8N865 590 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 SPATA18Q8TC71 538 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 TUT1Q9H6E5 874 aaKnown RBP13.05□□□□□ -0.32
HMGN1-220ENST00000492280 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 STRIP2Q9ULQ0 834 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 HEY1Q9Y5J3 304 aa13.05□□□□□ -0.32
HMGN1-220ENST00000492280 ZNF638Q14966 1978 aaKnown RBP13.05□□□□□ -0.32
HMGN1-220ENST00000492280 GAS2O43903 313 aaKnown RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 FGFR1P11362 822 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 EPHX2P34913 555 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 RPA3P35244 121 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 SLC20A2Q08357 652 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 MGAT5Q09328 741 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 TBC1D1Q86TI0 1168 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 ANKS4BQ8N8V4 417 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 FBXO36Q8NEA4 188 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 MAML1Q92585 1016 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 OSMRQ99650 979 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 C16orf70Q9BSU1 422 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 MAK16Q9BXY0 300 aaKnown RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 TRABDQ9H4I3 376 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 PCDH9Q9HC56 1237 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 PLXNB2O15031 1838 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 PDHXO00330 501 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 PFKMP08237 780 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 RABGGTBP53611 331 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 PPP6R3Q5H9R7 873 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 MARCH8Q5T0T0 291 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 ZNF618Q5T7W0 954 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 LRRC38Q5VT99 294 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 MTHFD1LQ6UB35 978 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 CYP4V2Q6ZWL3 525 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 TRPM8Q7Z2W7 1104 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 TRABD2AQ86V40 505 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 NIPA2Q8N8Q9 360 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 NDRG1Q92597 394 aaKnown RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 NKD2Q969F2 451 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 SYT17Q9BSW7 474 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 DDX56Q9NY93 547 aaKnown RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 MED7O43513 233 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 IL18RAPO95256 599 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 ITGAVP06756 1048 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 PDGFRBP09619 1106 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 SMPD1P17405 629 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 STAT4Q14765 748 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 GRIK4Q16099 956 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 HADHQ16836 314 aaKnown RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 CKAP2Q8WWK9 683 aa13.04□□□□□ -0.32
HMGN1-220ENST00000492280 NXF3Q9H4D5 531 aaKnown RBP13.04□□□□□ -0.32
HMGN1-220ENST00000492280 RNF8O76064 485 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 SNAI1O95863 264 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-220ENST00000492280 TRUB2O95900 331 aaKnown RBP13.03□□□□□ -0.32
HMGN1-220ENST00000492280 CA4P22748 312 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 IGFBP6P24592 240 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-220ENST00000492280 ADORA2BP29275 332 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 KCNJ2P63252 427 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 BBOF1Q8ND07 529 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 UPF1Q92900 1129 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMGN1-220ENST00000492280 ACAP3Q96P50 834 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 MROH8Q9H579 483 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 KLC4Q9NSK0 619 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 LGALS13Q9UHV8 139 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 XPO7Q9UIA9 1087 aaKnown RBP13.03□□□□□ -0.32
HMGN1-220ENST00000492280 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-220ENST00000492280 BPTFQ12830 3046 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 KRT7P08729 469 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 CCDC130P13994 396 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 TAC1P20366 129 aa13.03□□□□□ -0.32
HMGN1-220ENST00000492280 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms