RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 GCNAQ96QF7 691 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 C8orf33Q9H7E9 229 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 PARD6AQ9NPB6 346 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 HPS4Q9NQG7 708 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 OBP2AQ9NY56 170 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 MAGEC2Q9UBF1 373 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 GTF3C4Q9UKN8 822 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 ITGA11Q9UKX5 1188 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 MAGED2Q9UNF1 606 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 NME7Q9Y5B8 376 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 SNX9Q9Y5X1 595 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 PRR5-ARHGAP8B1AHC4 643 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 CHURC1-FNTBB4DL54 471 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 IKBKBO14920 756 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 PHACTR2O75167 634 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ATP2C2O75185 946 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 TMEM191BP0C7N4 346 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ARSAP15289 507 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 TGM1P22735 817 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 WEE1P30291 646 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 FNTBP49356 437 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 CCR3P51677 355 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ATXN1P54253 815 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 PSMC1P62191 440 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ARHGAP8P85298 464 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 TSPY1Q01534 308 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ENPEPQ07075 957 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 CCINQ13939 588 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 PSMD6Q15008 389 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 TAF12Q16514 161 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 STX1AQ16623 288 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ST3GAL2Q16842 350 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 SOWAHAQ2M3V2 549 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 CREBRFQ8IUR6 639 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 FAM114A1Q8IWE2 563 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ADGRF2Q8IZF7 708 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 CMTM8Q8IZV2 173 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 LRRC52Q8N7C0 313 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 TMC2Q8TDI7 906 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 KBTBD7Q8WVZ9 684 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 ACBD6Q9BR61 282 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 SRRTQ9BXP5 876 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 INTS13Q9NVM9 706 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 POLR3BQ9NW08 1133 aaPredicted RBP11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 GDAP2Q9NXN4 497 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 CHD8Q9HCK8 2581 aa11.77□□□□□ -0.53
TMEM39A-211ENST00000491685 SMTNL1A8MU46 457 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 GABRDO14764 452 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 HUS1O60921 280 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 NOL4O94818 638 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 DLATP10515 647 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 BMP6P22004 513 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CXCL12P48061 93 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 VAMP7P51809 220 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 STX17P56962 302 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 RBP5P82980 135 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 LMNB2Q03252 620 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CYP24A1Q07973 514 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CETN1Q12798 172 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 TRPC3Q13507 836 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 LRRC32Q14392 662 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CCDC40Q4G0X9 1142 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 HEATR6Q6AI08 1181 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 FSTL4Q6MZW2 842 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 RALGPS2Q86X27 583 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 FAM186BQ8IYM0 893 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 TMEM86AQ8N2M4 240 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 SPEM1Q8N4L4 309 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 TOP6BLQ8N6T0 577 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CELF5Q8N6W0 485 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 SECISBP2LQ93073 1101 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 MYLPFQ96A32 169 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CCDC127Q96BQ5 260 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 FAM83CQ9BQN1 747 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 FAM126AQ9BYI3 521 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 EBF3Q9H4W6 596 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CRTAC1Q9NQ79 661 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 GKN1Q9NS71 199 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 TMEM63CQ9P1W3 806 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CDV3Q9UKY7 258 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 CTNND2Q9UQB3 1225 aa11.76□□□□□ -0.53
TMEM39A-211ENST00000491685 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 SLC16A3O15427 465 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 HRO43593 1189 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 TPM2P07951 284 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 CSH1P0DML2 217 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 CSH2P0DML3 217 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 LMO2P25791 158 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 AVPR1AP37288 418 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 MYL7Q01449 175 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 MYO1EQ12965 1108 aa11.75□□□□□ -0.53
TMEM39A-211ENST00000491685 NFE2Q16621 373 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms