RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 USP4Q13107 963 aa8.8□□□□□ -1
LSM2-213ENST00000491421 CCINQ13939 588 aa8.8□□□□□ -1
LSM2-213ENST00000491421 GAS6Q14393 721 aa8.8□□□□□ -1
LSM2-213ENST00000491421 MTF1Q14872 753 aa8.8□□□□□ -1
LSM2-213ENST00000491421 ZNF77Q15935 545 aa8.8□□□□□ -1
LSM2-213ENST00000491421 ZNF667Q5HYK9 610 aa8.8□□□□□ -1
LSM2-213ENST00000491421 WDR44Q5JSH3 913 aa8.8□□□□□ -1
LSM2-213ENST00000491421 SCARA5Q6ZMJ2 495 aa8.8□□□□□ -1
LSM2-213ENST00000491421 KRBA2Q6ZNG9 492 aa8.8□□□□□ -1
LSM2-213ENST00000491421 KIAA2013Q8IYS2 634 aa8.8□□□□□ -1
LSM2-213ENST00000491421 SYNPOQ8N3V7 929 aa8.8□□□□□ -1
LSM2-213ENST00000491421 CPA6Q8N4T0 437 aa8.8□□□□□ -1
LSM2-213ENST00000491421 ARL14EPQ8N8R7 260 aaPredicted RBP8.8□□□□□ -1
LSM2-213ENST00000491421 B3GALNT2Q8NCR0 500 aa8.8□□□□□ -1
LSM2-213ENST00000491421 TMC2Q8TDI7 906 aa8.8□□□□□ -1
LSM2-213ENST00000491421 SH3RF2Q8TEC5 729 aa8.8□□□□□ -1
LSM2-213ENST00000491421 TNIP3Q96KP6 325 aa8.8□□□□□ -1
LSM2-213ENST00000491421 C8orf48Q96LL4 319 aa8.8□□□□□ -1
LSM2-213ENST00000491421 ARID3AQ99856 593 aa8.8□□□□□ -1
LSM2-213ENST00000491421 TTLL2Q9BWV7 592 aa8.8□□□□□ -1
LSM2-213ENST00000491421 ZNF518BQ9C0D4 1074 aa8.8□□□□□ -1
LSM2-213ENST00000491421 EPC1Q9H2F5 836 aa8.8□□□□□ -1
LSM2-213ENST00000491421 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
LSM2-213ENST00000491421 DUS2Q9NX74 493 aaKnown RBP8.8□□□□□ -1
LSM2-213ENST00000491421 TRPM5Q9NZQ8 1165 aa8.8□□□□□ -1
LSM2-213ENST00000491421 GCNT4Q9P109 453 aa8.8□□□□□ -1
LSM2-213ENST00000491421 NCDNQ9UBB6 729 aa8.8□□□□□ -1
LSM2-213ENST00000491421 SMG5Q9UPR3 1016 aaKnown RBP8.8□□□□□ -1
LSM2-213ENST00000491421 TRAF3IP3Q9Y228 551 aa8.8□□□□□ -1
LSM2-213ENST00000491421 F5P12259 2224 aa8.8□□□□□ -1
LSM2-213ENST00000491421 ATP8B3O60423 1300 aa8.8□□□□□ -1
LSM2-213ENST00000491421 FAM186AA6NE01 2351 aa8.79□□□□□ -1
LSM2-213ENST00000491421 OTOL1A6NHN0 477 aaPredicted RBP8.79□□□□□ -1
LSM2-213ENST00000491421 CLDN5O00501 218 aa8.79□□□□□ -1
LSM2-213ENST00000491421 IKBKBO14920 756 aa8.79□□□□□ -1
LSM2-213ENST00000491421 ZNF202O95125 648 aa8.79□□□□□ -1
LSM2-213ENST00000491421 VNN1O95497 513 aa8.79□□□□□ -1
LSM2-213ENST00000491421 PFKLP17858 780 aa8.79□□□□□ -1
LSM2-213ENST00000491421 NR2F2P24468 414 aa8.79□□□□□ -1
LSM2-213ENST00000491421 PIK3CAP42336 1068 aa8.79□□□□□ -1
LSM2-213ENST00000491421 PPP3CCP48454 512 aa8.79□□□□□ -1
LSM2-213ENST00000491421 IFNAR2P48551 515 aa8.79□□□□□ -1
LSM2-213ENST00000491421 VAMP7P51809 220 aa8.79□□□□□ -1
LSM2-213ENST00000491421 CACNA2D1P54289 1103 aa8.79□□□□□ -1
LSM2-213ENST00000491421 CDH8P55286 799 aa8.79□□□□□ -1
LSM2-213ENST00000491421 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
LSM2-213ENST00000491421 BECN1Q14457 450 aa8.79□□□□□ -1
LSM2-213ENST00000491421 SGSM1Q2NKQ1 1148 aa8.79□□□□□ -1
LSM2-213ENST00000491421 ZACNQ401N2 412 aa8.79□□□□□ -1
LSM2-213ENST00000491421 SV2AQ7L0J3 742 aa8.79□□□□□ -1
LSM2-213ENST00000491421 DCLK2Q8N568 766 aa8.79□□□□□ -1
LSM2-213ENST00000491421 OSCP1Q8WVF1 389 aa8.79□□□□□ -1
LSM2-213ENST00000491421 TAF4BQ92750 862 aa8.79□□□□□ -1
LSM2-213ENST00000491421 SECISBP2LQ93073 1101 aaKnown RBP8.79□□□□□ -1
LSM2-213ENST00000491421 ATP2A3Q93084 1043 aa8.79□□□□□ -1
LSM2-213ENST00000491421 EXOC4Q96A65 974 aa8.79□□□□□ -1
LSM2-213ENST00000491421 ELMO3Q96BJ8 720 aa8.79□□□□□ -1
LSM2-213ENST00000491421 CCDC34Q96HJ3 373 aa8.79□□□□□ -1
LSM2-213ENST00000491421 SLITRK1Q96PX8 696 aa8.79□□□□□ -1
LSM2-213ENST00000491421 MED10Q9BTT4 135 aa8.79□□□□□ -1
LSM2-213ENST00000491421 B3GNT5Q9BYG0 378 aa8.79□□□□□ -1
LSM2-213ENST00000491421 ECT2Q9H8V3 914 aa8.79□□□□□ -1
LSM2-213ENST00000491421 ARHGAP26Q9UNA1 814 aa8.79□□□□□ -1
LSM2-213ENST00000491421 MAPK8IP1Q9UQF2 711 aa8.79□□□□□ -1
LSM2-213ENST00000491421 WNT6Q9Y6F9 365 aa8.79□□□□□ -1
LSM2-213ENST00000491421 TCHHQ07283 1943 aa8.79□□□□□ -1
LSM2-213ENST00000491421 MIA3Q5JRA6 1907 aa8.79□□□□□ -1
LSM2-213ENST00000491421 TICRRQ7Z2Z1 1910 aa8.79□□□□□ -1
LSM2-213ENST00000491421 EP300Q09472 2414 aaPredicted RBP8.79□□□□□ -1
LSM2-213ENST00000491421 GPR179Q6PRD1 2367 aa8.78□□□□□ -1
LSM2-213ENST00000491421 ZNF840PA6NDX5 716 aa8.78□□□□□ -1
LSM2-213ENST00000491421 CHURC1-FNTBB4DL54 471 aa8.78□□□□□ -1
LSM2-213ENST00000491421 K7ESF4 209 aa8.78□□□□□ -1
LSM2-213ENST00000491421 TRDMT1O14717 391 aaKnown RBP8.78□□□□□ -1
LSM2-213ENST00000491421 MAPK13O15264 365 aa8.78□□□□□ -1
LSM2-213ENST00000491421 AKAP3O75969 853 aa8.78□□□□□ -1
LSM2-213ENST00000491421 PAPSS2O95340 614 aaPredicted RBP8.78□□□□□ -1
LSM2-213ENST00000491421 ABL1P00519 1130 aa8.78□□□□□ -1
LSM2-213ENST00000491421 HLA-DRAP01903 254 aa8.78□□□□□ -1
LSM2-213ENST00000491421 KRT13P13646 458 aa8.78□□□□□ -1
LSM2-213ENST00000491421 TCF3P15923 654 aa8.78□□□□□ -1
LSM2-213ENST00000491421 RPL13P26373 211 aaKnown RBP8.78□□□□□ -1
LSM2-213ENST00000491421 ID4P47928 161 aa8.78□□□□□ -1
LSM2-213ENST00000491421 FNTBP49356 437 aa8.78□□□□□ -1
LSM2-213ENST00000491421 NDST1P52848 882 aa8.78□□□□□ -1
LSM2-213ENST00000491421 TAF10Q12962 218 aa8.78□□□□□ -1
LSM2-213ENST00000491421 NFIL3Q16649 462 aa8.78□□□□□ -1
LSM2-213ENST00000491421 EML3Q32P44 896 aa8.78□□□□□ -1
LSM2-213ENST00000491421 TMEM196Q5HYL7 178 aa8.78□□□□□ -1
LSM2-213ENST00000491421 C1orf220Q5T0J3 134 aa8.78□□□□□ -1
LSM2-213ENST00000491421 HEATR6Q6AI08 1181 aaKnown RBP8.78□□□□□ -1
LSM2-213ENST00000491421 FSTL4Q6MZW2 842 aa8.78□□□□□ -1
LSM2-213ENST00000491421 INTS8Q75QN2 995 aaKnown RBP8.78□□□□□ -1
LSM2-213ENST00000491421 ACOT1Q86TX2 421 aa8.78□□□□□ -1
LSM2-213ENST00000491421 FAM35AQ86V20 835 aa8.78□□□□□ -1
LSM2-213ENST00000491421 FAM186BQ8IYM0 893 aa8.78□□□□□ -1
LSM2-213ENST00000491421 NUP93Q8N1F7 819 aa8.78□□□□□ -1
LSM2-213ENST00000491421 GUF1Q8N442 669 aaKnown RBP8.78□□□□□ -1
LSM2-213ENST00000491421 CHFRQ96EP1 664 aa8.78□□□□□ -1
LSM2-213ENST00000491421 P2RY13Q9BPV8 354 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms