RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 PTPN21Q16825 1174 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 MTHFD1LQ6UB35 978 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 SLC15A3Q8IY34 581 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 SMRP1Q8NCR6 262 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 ACRBPQ8NEB7 543 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 OSCP1Q8WVF1 389 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 FAM167AQ96KS9 214 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 GABRQQ9UN88 632 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 PLEKHM1Q9Y4G2 1056 aa5.1□□□□□ -1.59
PHC3-213ENST00000491258 LY6G6EA0A0G2JKS1 128 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 H3BUI4 141 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 AP4M1O00189 453 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 KATNA1O75449 491 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 GCATO75600 419 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 ZRANB2O95218 330 aaKnown RBP eCLIP5.09□□□□□ -1.59
PHC3-213ENST00000491258 PRKCBP05771 671 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 HOXD9P28356 352 aaPredicted RBP5.09□□□□□ -1.59
PHC3-213ENST00000491258 SOX8P57073 446 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 E2F1Q01094 437 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 CCDC157Q569K6 752 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 RNASE12Q5GAN4 147 aaKnown RBP5.09□□□□□ -1.59
PHC3-213ENST00000491258 C10orf25Q5T742 122 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 MEX3CQ5U5Q3 659 aaKnown RBP5.09□□□□□ -1.59
PHC3-213ENST00000491258 DPY19L3Q6ZPD9 716 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 MMS19Q96T76 1030 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 TMX1Q9H3N1 280 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 USP35Q9P2H5 1018 aa5.09□□□□□ -1.59
PHC3-213ENST00000491258 TCRBV5S1A1TA0A578 114 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 CD8B2A6NJW9 211 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 ABLIM3O94929 683 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 OAZ2O95190 189 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 A1BGP04217 495 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 ALPLP05186 524 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 CYP19A1P11511 503 aaPredicted RBP5.08□□□□□ -1.6
PHC3-213ENST00000491258 ADORA2AP29274 412 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 VIPR2P41587 438 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 HTRA4P83105 476 aaPredicted RBP5.08□□□□□ -1.6
PHC3-213ENST00000491258 TWIST1Q15672 202 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 CAND1Q86VP6 1230 aaKnown RBP5.08□□□□□ -1.6
PHC3-213ENST00000491258 OSR1Q8TAX0 266 aaPredicted RBP5.08□□□□□ -1.6
PHC3-213ENST00000491258 ADAMTS18Q8TE60 1221 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 CCDC17Q96LX7 622 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 FYTTD1Q96QD9 318 aaKnown RBP5.08□□□□□ -1.6
PHC3-213ENST00000491258 PI4KBQ9UBF8 816 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 XPR1Q9UBH6 696 aa5.08□□□□□ -1.6
PHC3-213ENST00000491258 ZCCHC6Q5VYS8 1495 aaKnown RBP5.07□□□□□ -1.6
PHC3-213ENST00000491258 H3BNX3 289 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 RNF8O76064 485 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 VNN1O95497 513 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 CSF1RP07333 972 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 LRPAP1P30533 357 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 THBS3P49746 956 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 ZNF91Q05481 1191 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 MYO1EQ12965 1108 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 FAM50AQ14320 339 aaKnown RBP5.07□□□□□ -1.6
PHC3-213ENST00000491258 PLS1Q14651 629 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 CYP1B1Q16678 543 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 LY6KQ17RY6 165 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 USP45Q70EL2 814 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 CXorf36Q9H7Y0 433 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 PCDHA6Q9UN73 950 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 SQORQ9Y6N5 450 aa5.07□□□□□ -1.6
PHC3-213ENST00000491258 MYCLP12524 364 aaPredicted RBP5.06□□□□□ -1.6
PHC3-213ENST00000491258 KRT17Q04695 432 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 KHDC1LQ5JSQ8 128 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 EMC10Q5UCC4 262 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 BCDIN3DQ7Z5W3 292 aaKnown RBP5.06□□□□□ -1.6
PHC3-213ENST00000491258 ZNF280BQ86YH2 543 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 SLC35A4Q96G79 324 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 PRR25Q96S07 402 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 SLC13A1Q9BZW2 595 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 SARS2Q9NP81 518 aaKnown RBP5.06□□□□□ -1.6
PHC3-213ENST00000491258 TRMT13Q9NUP7 481 aaKnown RBP5.06□□□□□ -1.6
PHC3-213ENST00000491258 POT1Q9NUX5 634 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 ASIC5Q9NY37 505 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 TMX2Q9Y320 296 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 DCAF1Q9Y4B6 1507 aa5.06□□□□□ -1.6
PHC3-213ENST00000491258 TNKSO95271 1327 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 BTBD19C9JJ37 291 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 HTR6P50406 440 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 PSG6Q00889 435 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 LEXMQ3ZCV2 418 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 IZUMO1Q8IYV9 350 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 ABRAQ8N0Z2 381 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 PRR18Q8N4B5 295 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 SIRT6Q8N6T7 355 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 AMFRQ9UKV5 643 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 SNX14Q9Y5W7 946 aa5.05□□□□□ -1.6
PHC3-213ENST00000491258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.05□□□□□ -1.6
PHC3-213ENST00000491258 CES2O00748 559 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 CDK11BP21127 795 aaKnown RBP5.04□□□□□ -1.6
PHC3-213ENST00000491258 UCP3P55916 312 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 NANOS2P60321 138 aaKnown RBP5.04□□□□□ -1.6
PHC3-213ENST00000491258 NKX6-1P78426 367 aaPredicted RBP5.04□□□□□ -1.6
PHC3-213ENST00000491258 SEMA3AQ14563 771 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 AWAT1Q58HT5 328 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 CATIPQ7Z7H3 387 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
PHC3-213ENST00000491258 MAP4K1Q92918 833 aa5.04□□□□□ -1.6
PHC3-213ENST00000491258 LYZL4Q96KX0 146 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms