RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 CEP295NLQ96MC4 621 aa13.6□□□□□ -0.23
LIMK1-207ENST00000491052 KCNK16Q96T55 309 aa13.6□□□□□ -0.23
LIMK1-207ENST00000491052 HNRNPABQ99729 332 aaKnown RBP13.6□□□□□ -0.23
LIMK1-207ENST00000491052 IL21Q9HBE4 155 aa13.6□□□□□ -0.23
LIMK1-207ENST00000491052 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
LIMK1-207ENST00000491052 EHD2Q9NZN4 543 aa13.6□□□□□ -0.23
LIMK1-207ENST00000491052 APEX2Q9UBZ4 518 aa13.6□□□□□ -0.23
LIMK1-207ENST00000491052 MIA3Q5JRA6 1907 aa13.6□□□□□ -0.23
LIMK1-207ENST00000491052 DCXO43602 365 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 BEST1O76090 585 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 ZNF18P17022 549 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 ACO1P21399 889 aaKnown RBP13.59□□□□□ -0.23
LIMK1-207ENST00000491052 MFAP3P55082 362 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 USP46P62068 366 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 HTR4Q13639 388 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 GOLGA7BQ2TAP0 167 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 FKBP15Q5T1M5 1219 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 ENOSF1Q7L5Y1 443 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 ZSCAN18Q8TBC5 510 aaPredicted RBP13.59□□□□□ -0.23
LIMK1-207ENST00000491052 RSAD2Q8WXG1 361 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 MRPS31Q92665 395 aaKnown RBP13.59□□□□□ -0.23
LIMK1-207ENST00000491052 FAM81BQ96LP2 452 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 MYRFLQ96LU7 910 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 ZSWIM3Q96MP5 696 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 SMOQ99835 787 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 KXD1Q9BQD3 176 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
LIMK1-207ENST00000491052 KCNK12Q9HB15 430 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 SIX2Q9NPC8 291 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 IGSF9Q9P2J2 1179 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 LIMA1Q9UHB6 759 aaKnown RBP13.59□□□□□ -0.23
LIMK1-207ENST00000491052 SORCS3Q9UPU3 1222 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 NUMBLQ9Y6R0 609 aa13.59□□□□□ -0.23
LIMK1-207ENST00000491052 ANHXE9PGG2 379 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 RTN3O95197 1032 aaPredicted RBP13.58□□□□□ -0.24
LIMK1-207ENST00000491052 F11P03951 625 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 PAEPP09466 180 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 VDRP11473 427 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 ATP1A3P13637 1013 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 NPR3P17342 541 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 USP8P40818 1118 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 SLC5A3P53794 718 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 FAM78AQ5JUQ0 283 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 ARHGAP17Q68EM7 881 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 POTEHQ6S545 545 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 PARM1Q6UWI2 310 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 CLEC20AQ6ZU45 233 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 TMEM150AQ86TG1 271 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 NUP93Q8N1F7 819 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 FGF14Q92915 247 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 GPR88Q9GZN0 384 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 TASP1Q9H6P5 420 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 CBX8Q9HC52 389 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 TRPC7Q9HCX4 862 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 HESX1Q9UBX0 185 aa13.58□□□□□ -0.24
LIMK1-207ENST00000491052 MYOFQ9NZM1 2061 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 RNF225M0QZC1 329 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-207ENST00000491052 TADA3O75528 432 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 CALCAP01258 141 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 ALADP13716 330 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 BRD2P25440 801 aaKnown RBP13.57□□□□□ -0.24
LIMK1-207ENST00000491052 YWHAQP27348 245 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 ZNF132P52740 706 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 SLC8A3P57103 927 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 TPM4P67936 248 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 KCNMA1Q12791 1236 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 TAF10Q12962 218 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 TDGQ13569 410 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 SCAMP5Q8TAC9 235 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 SMARCD2Q92925 531 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 FBXO32Q969P5 355 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 PCMTD1Q96MG8 357 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-207ENST00000491052 ASB16Q96NS5 453 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 DUSP16Q9BY84 665 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 SMOC2Q9H3U7 446 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 ZFP14Q9HCL3 533 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 CSNK1G1Q9HCP0 422 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 TRPM5Q9NZQ8 1165 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 DNAJC12Q9UKB3 198 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 AJAP1Q9UKB5 411 aaPredicted RBP13.57□□□□□ -0.24
LIMK1-207ENST00000491052 TSPAN16Q9UKR8 245 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 KIAA1257Q9ULG3 409 aa13.57□□□□□ -0.24
LIMK1-207ENST00000491052 COL4A2P08572 1712 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 O00370 1275 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 TNFRSF10BO14763 440 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 CAVIN2O95810 425 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 ABL1P00519 1130 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 FCARP24071 287 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 DDX6P26196 483 aaKnown RBP eCLIP13.56□□□□□ -0.24
LIMK1-207ENST00000491052 BCAT1P54687 386 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 UBXN1Q04323 297 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 RAPGEF1Q13905 1077 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 IQCB1Q15051 598 aa13.56□□□□□ -0.24
LIMK1-207ENST00000491052 TXNDC8Q6A555 127 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms