RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 MAPK13O15264 365 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 CCR3P51677 355 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 CACNA2D1P54289 1103 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 USP4Q13107 963 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 RUNX3Q13761 415 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 PPP2R5DQ14738 602 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 MTF1Q14872 753 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 SGSM1Q2NKQ1 1148 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 FAM186BQ8IYM0 893 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 ATRIPQ8WXE1 791 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 TNIP3Q96KP6 325 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 MED10Q9BTT4 135 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 TTLL2Q9BWV7 592 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 SDCBP2Q9H190 292 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 ZSCAN32Q9NX65 697 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 TRPM5Q9NZQ8 1165 aa19.44■□□□□ 0.7
SBDS-204ENST00000490953 ZFHX2Q9C0A1 2572 aaPredicted RBP19.44■□□□□ 0.7
SBDS-204ENST00000490953 AKAP3O75969 853 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 HLA-DRAP01903 254 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 TRIM49P0CI25 452 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 TRIM49CP0CI26 452 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 KRT13P13646 458 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 ARSAP15289 507 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 RPL13P26373 211 aaKnown RBP19.43■□□□□ 0.7
SBDS-204ENST00000490953 PDE6CP51160 858 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 NOP14P78316 857 aaKnown RBP19.43■□□□□ 0.7
SBDS-204ENST00000490953 IFRD2Q12894 506 aaPredicted RBP19.43■□□□□ 0.7
SBDS-204ENST00000490953 PNOCQ13519 176 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 PDGFRLQ15198 375 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 ZNF77Q15935 545 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 WDR44Q5JSH3 913 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 DGKKQ5KSL6 1271 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 C1orf220Q5T0J3 134 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 INTS8Q75QN2 995 aaKnown RBP19.43■□□□□ 0.7
SBDS-204ENST00000490953 TAF4BQ92750 862 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 TMEM30AQ9NV96 361 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 GCNT4Q9P109 453 aa19.43■□□□□ 0.7
SBDS-204ENST00000490953 HDCP19113 662 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 PSMC2P35998 433 aaKnown RBP19.42■□□□□ 0.7
SBDS-204ENST00000490953 GAS6Q14393 721 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 SPOPLQ6IQ16 392 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 MAMSTRQ6ZN01 415 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 Q6ZS52 159 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 FAM35AQ86V20 835 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 SMYD4Q8IYR2 804 aaPredicted RBP19.42■□□□□ 0.7
SBDS-204ENST00000490953 FMR1NBQ8N0W7 255 aaPredicted RBP19.42■□□□□ 0.7
SBDS-204ENST00000490953 ZBTB44Q8NCP5 570 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 SH3RF2Q8TEC5 729 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 HINFPQ9BQA5 517 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 IMPG2Q9BZV3 1241 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 MMRN2Q9H8L6 949 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.42■□□□□ 0.7
SBDS-204ENST00000490953 RMND1Q9NWS8 449 aa19.42■□□□□ 0.7
SBDS-204ENST00000490953 DUS2Q9NX74 493 aaKnown RBP19.42■□□□□ 0.7
SBDS-204ENST00000490953 ABL1P00519 1130 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 ASS1P00966 412 aaKnown RBP19.41■□□□□ 0.7
SBDS-204ENST00000490953 PFKLP17858 780 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 CXCL12P48061 93 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 PPP3CCP48454 512 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 GCLMP48507 274 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 IFNAR2P48551 515 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 SATB1Q01826 763 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 TAF10Q12962 218 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 ADAM9Q13443 819 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 ZCWPW2Q504Y3 356 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 ACOT1Q86TX2 421 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 SPEM1Q8N4L4 309 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 CPA6Q8N4T0 437 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 OSCP1Q8WVF1 389 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 NELL1Q92832 810 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 SMARCD1Q96GM5 515 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 SLITRK1Q96PX8 696 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 FAM126AQ9BYI3 521 aaPredicted RBP19.41■□□□□ 0.7
SBDS-204ENST00000490953 ARHGAP26Q9UNA1 814 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 WNT6Q9Y6F9 365 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 MYH10P35580 1976 aa19.41■□□□□ 0.7
SBDS-204ENST00000490953 VPS13AQ96RL7 3174 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 ZNF840PA6NDX5 716 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 OTOL1A6NHN0 477 aaPredicted RBP19.4■□□□□ 0.7
SBDS-204ENST00000490953 TDGF1P13385 188 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 ASPAP45381 313 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 NDST1P52848 882 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 NRLP54845 237 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 AMPD2Q01433 879 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 PPP3CAQ08209 521 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 ORC1Q13415 861 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 CCINQ13939 588 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 EDRF1Q3B7T1 1238 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 NUP93Q8N1F7 819 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 ATP2A3Q93084 1043 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 DMAP1Q9NPF5 467 aaPredicted RBP19.4■□□□□ 0.7
SBDS-204ENST00000490953 HMGXB4Q9UGU5 601 aa19.4■□□□□ 0.7
SBDS-204ENST00000490953 LILRB5O75023 590 aa19.39■□□□□ 0.69
SBDS-204ENST00000490953 AP1G2O75843 785 aa19.39■□□□□ 0.69
SBDS-204ENST00000490953 RTN3O95197 1032 aaPredicted RBP19.39■□□□□ 0.69
SBDS-204ENST00000490953 TCF3P15923 654 aa19.39■□□□□ 0.69
SBDS-204ENST00000490953 YWHAQP27348 245 aa19.39■□□□□ 0.69
SBDS-204ENST00000490953 ENPEPQ07075 957 aa19.39■□□□□ 0.69
SBDS-204ENST00000490953 GRSF1Q12849 480 aaKnown RBP eCLIP19.39■□□□□ 0.69
SBDS-204ENST00000490953 UNC93AQ86WB7 457 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms