RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 KRT39Q6A163 491 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 FAM35AQ86V20 835 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 TTC8Q8TAM2 541 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 SMARCD1Q96GM5 515 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 TTLL2Q9BWV7 592 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 SEMA4AQ9H3S1 761 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 DMAP1Q9NPF5 467 aaPredicted RBP18.55■□□□□ 0.56
SEC13-218ENST00000490283 GKN1Q9NS71 199 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 GTSE1Q9NYZ3 720 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 FBXO4Q9UKT5 387 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 CCL26Q9Y258 94 aa18.55■□□□□ 0.56
SEC13-218ENST00000490283 NUP210Q8TEM1 1887 aaPredicted RBP18.54■□□□□ 0.56
SEC13-218ENST00000490283 PSMA7O14818 248 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 SLC16A3O15427 465 aaKnown RBP18.54■□□□□ 0.56
SEC13-218ENST00000490283 ABL1P00519 1130 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 SP9P0CG40 484 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 HDCP19113 662 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 CTHP32929 405 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 SOX9P48436 509 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 MXI1P50539 228 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 NDST1P52848 882 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 FKBP3Q00688 224 aaKnown RBP18.54■□□□□ 0.56
SEC13-218ENST00000490283 LRRC63Q05C16 580 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 PPP3CAQ08209 521 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 IFRD2Q12894 506 aaPredicted RBP18.54■□□□□ 0.56
SEC13-218ENST00000490283 PDGFRLQ15198 375 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 TCERG1LQ5VWI1 586 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 SPOPLQ6IQ16 392 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 ACOT1Q86TX2 421 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 ELOA2Q8IYF1 753 aaPredicted RBP18.54■□□□□ 0.56
SEC13-218ENST00000490283 NUP93Q8N1F7 819 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 ARL14EPQ8N8R7 260 aaPredicted RBP18.54■□□□□ 0.56
SEC13-218ENST00000490283 PDZD8Q8NEN9 1154 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 SPATA20Q8TB22 786 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 TAS1R2Q8TE23 839 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 EXOC4Q96A65 974 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 ELMO3Q96BJ8 720 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 NIF3L1Q9GZT8 377 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 SDCBP2Q9H190 292 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 LMAN1LQ9HAT1 526 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 CYP3A43Q9HB55 503 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.54■□□□□ 0.56
SEC13-218ENST00000490283 COL4A3Q01955 1670 aa18.54■□□□□ 0.56
SEC13-218ENST00000490283 YWHAQP27348 245 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 ASPAP45381 313 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 IFNAR2P48551 515 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 USP46P62068 366 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 CSTF1Q05048 431 aaKnown RBP18.53■□□□□ 0.56
SEC13-218ENST00000490283 TNK2Q07912 1038 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 RUNX3Q13761 415 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 MTF1Q14872 753 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 ZNF528Q3MIS6 628 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 DCAF17Q5H9S7 520 aaPredicted RBP18.53■□□□□ 0.56
SEC13-218ENST00000490283 DGKKQ5KSL6 1271 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 ERCC4Q92889 916 aaPredicted RBP18.53■□□□□ 0.56
SEC13-218ENST00000490283 EEF2KMTQ96G04 330 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 CYP2S1Q96SQ9 504 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 CHRDQ9H2X0 955 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 KRT82Q9NSB4 513 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 MIA3Q5JRA6 1907 aa18.53■□□□□ 0.56
SEC13-218ENST00000490283 C2orf78A6NCI8 922 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 SHISA7A6NL88 538 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 AP1G2O75843 785 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 TAF10Q12962 218 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 WDR44Q5JSH3 913 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 ADSSL1Q8N142 457 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 CRYBG2Q8N1P7 616 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 CPA6Q8N4T0 437 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 TTC39CQ8N584 583 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 FBXL13Q8NEE6 735 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 FBXO32Q969P5 355 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 FAM83CQ9BQN1 747 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 NT5C1AQ9BXI3 368 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 EBF3Q9H4W6 596 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 DUS2Q9NX74 493 aaKnown RBP18.52■□□□□ 0.56
SEC13-218ENST00000490283 ARHGAP26Q9UNA1 814 aa18.52■□□□□ 0.56
SEC13-218ENST00000490283 TICRRQ7Z2Z1 1910 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 PRR23AA6NEV1 266 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 CCDC130P13994 396 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 CCR3P51677 355 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 CACNA2D1P54289 1103 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 INCA1Q0VD86 236 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 USP4Q13107 963 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 MTAPQ13126 283 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 ORC1Q13415 861 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 ZNF77Q15935 545 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 ANKRD40Q6AI12 368 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 SLC2A14Q8TDB8 520 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 SH3RF2Q8TEC5 729 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 OVCA2Q8WZ82 227 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 ATP2A3Q93084 1043 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 DHTKD1Q96HY7 919 aaPredicted RBP18.51■□□□□ 0.55
SEC13-218ENST00000490283 FAXDC2Q96IV6 333 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 SLC22A12Q96S37 553 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 FAM49BQ9NUQ9 324 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 COMMD8Q9NX08 183 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 GCNT4Q9P109 453 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 R4GN57 208 aa18.51■□□□□ 0.55
SEC13-218ENST00000490283 ZNF840PA6NDX5 716 aa18.5■□□□□ 0.55
SEC13-218ENST00000490283 FAM200BP0CF97 657 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms