RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 A0A087WZ62 844 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 F5H423 210 aaPredicted RBP4.69□□□□□ -1.66
CD46-216ENST00000490278 HNRNPDLO14979 420 aaKnown RBP4.69□□□□□ -1.66
CD46-216ENST00000490278 ADAMTS3O15072 1205 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 YY2O15391 372 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 TPD52L2O43399 206 aaKnown RBP4.69□□□□□ -1.66
CD46-216ENST00000490278 PEX1O43933 1283 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 PLA2G6O60733 806 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 NDST3O95803 873 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 ADH4P08319 380 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 PRKAR1BP31321 381 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 MCM7P33993 719 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 IL6STP40189 918 aaPredicted RBP4.69□□□□□ -1.66
CD46-216ENST00000490278 TAP1Q03518 808 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 CCNIQ14094 377 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 PUM1Q14671 1186 aaKnown RBP eCLIP4.69□□□□□ -1.66
CD46-216ENST00000490278 CERCAMQ5T4B2 595 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 TEDDM1Q5T9Z0 273 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 IGFL4Q6B9Z1 124 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 MZT2AQ6P582 158 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 CRIP3Q6Q6R5 217 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 USP17L6PQ6QN14 398 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 DTX2Q86UW9 622 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 MYLK4Q86YV6 388 aaPredicted RBP4.69□□□□□ -1.66
CD46-216ENST00000490278 DNAJB14Q8TBM8 379 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 OSCP1Q8WVF1 389 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 ATG4AQ8WYN0 398 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 FKBP10Q96AY3 582 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 TMEM41AQ96HV5 264 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 ZNF668Q96K58 619 aaPredicted RBP4.69□□□□□ -1.66
CD46-216ENST00000490278 SNX27Q96L92 541 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 COQ10AQ96MF6 247 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 GDF15Q99988 308 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 CRB3Q9BUF7 120 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 CYP4F11Q9HBI6 524 aa4.69□□□□□ -1.66
CD46-216ENST00000490278 CD3EAPO15446 510 aaKnown RBP4.68□□□□□ -1.66
CD46-216ENST00000490278 KCNQ3O43525 872 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 TLR5O60602 858 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 RHOP08100 348 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 PDHA1P08559 390 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 HKR1P10072 659 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 IDEP14735 1019 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 TNFRSF1AP19438 455 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 TGM1P22735 817 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 GABRB3P28472 473 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 ADORA2AP29274 412 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 AVPR1BP47901 424 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 BCAT1P54687 386 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 SP2Q02086 613 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 TNFAIP2Q03169 654 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 EIF2B5Q13144 721 aaKnown RBP4.68□□□□□ -1.66
CD46-216ENST00000490278 GRM1Q13255 1194 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 KCNAB1Q14722 419 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 STARD3Q14849 445 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 PTPRRQ15256 657 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 DEPDC1Q5TB30 811 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 FBXO38Q6PIJ6 1188 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 CRTC1Q6UUV9 634 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 Q6ZNX1 250 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 ABRAQ8N0Z2 381 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 CYP2W1Q8TAV3 490 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 ZNF384Q8TF68 577 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 TMEM171Q8WVE6 324 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 POF1BQ8WVV4 589 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 ATRIPQ8WXE1 791 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 LINC00476Q8WZB0 136 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 FBXL20Q96IG2 436 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 ALG8Q9BVK2 526 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 TTLL2Q9BWV7 592 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 STK33Q9BYT3 514 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 AS3MTQ9HBK9 375 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 TM7SF3Q9NS93 570 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 KLC4Q9NSK0 619 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 MAGED2Q9UNF1 606 aaPredicted RBP4.68□□□□□ -1.66
CD46-216ENST00000490278 HPSEQ9Y251 543 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 SNX14Q9Y5W7 946 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 MAST3O60307 1309 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 ADGRA2Q96PE1 1338 aa4.68□□□□□ -1.66
CD46-216ENST00000490278 A0A087WV62 115 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 FAM234BA2RU67 622 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 PODXLO00592 558 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 SLC16A3O15427 465 aaKnown RBP4.67□□□□□ -1.66
CD46-216ENST00000490278 MPPED1O15442 326 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 CHRM2P08172 466 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 ATICP31939 592 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 FOLR3P41439 243 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 ATXN1P54253 815 aaKnown RBP4.67□□□□□ -1.66
CD46-216ENST00000490278 ABHD18Q0P651 414 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 KRT72Q14CN4 511 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 TBCCQ15814 346 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 NBPF8Q3BBV2 869 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 ZNF618Q5T7W0 954 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 KIAA0408Q6ZU52 694 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 KRT73Q86Y46 540 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 VRK3Q8IV63 474 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 SLC44A3Q8N4M1 653 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 GLIS1Q8NBF1 620 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 MORC4Q8TE76 937 aa4.67□□□□□ -1.66
CD46-216ENST00000490278 CAVIN3Q969G5 261 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms