RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 FAM160A1Q05DH4 1040 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 TNK2Q07912 1038 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 KCNB1Q14721 858 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 TAF12Q16514 161 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 ITPRIPL2Q3MIP1 535 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 ZACNQ401N2 412 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 STKLD1Q8NE28 680 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 EPC1Q9H2F5 836 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 EXOC1Q9NV70 894 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 ATP6V1DQ9Y5K8 247 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 GREB1Q4ZG55 1949 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 ZNF840PA6NDX5 716 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 K7ESF4 209 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 OBSL1O75147 1896 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 AVPR1AP37288 418 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 CXCL12P48061 93 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 PPP3CCP48454 512 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 CCR3P51677 355 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 KPNA1P52294 538 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 CACNA2D1P54289 1103 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 USP46P62068 366 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 DLG4P78352 724 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 RUNX3Q13761 415 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 NCOA4Q13772 614 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 PDGFRLQ15198 375 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 ZNF77Q15935 545 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 SGSM1Q2NKQ1 1148 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 ZCWPW2Q504Y3 356 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 TMEM196Q5HYL7 178 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 TSSK4Q6SA08 328 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 KRBA2Q6ZNG9 492 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 PAQR9Q6ZVX9 377 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 CRYBG2Q8N1P7 616 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 GUF1Q8N442 669 aaKnown RBP10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 B3GALNT2Q8NCR0 500 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 RUBCNQ92622 972 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 TAF4BQ92750 862 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 CYP2S1Q96SQ9 504 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 B3GNT5Q9BYG0 378 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 SDCBP2Q9H190 292 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 SNX25Q9H3E2 840 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 GOLPH3LQ9H4A5 285 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 ARHGAP26Q9UNA1 814 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 MAGED2Q9UNF1 606 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 PTPRDP23468 1912 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 ANAPC1Q9H1A4 1944 aa10.37□□□□□ -0.75
TMEM39A-210ENST00000490099 CACNA1AO00555 2505 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 TRAV19A0A0A6YYK7 116 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 FAM92AA1XBS5 289 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 TNFRSF10BO14763 440 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 TRIM66O15016 1216 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 KINO60870 393 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 ZNF202O95125 648 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 ASS1P00966 412 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 USP17L7P0C7H9 530 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 HDCP19113 662 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 TGM1P22735 817 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 NRLP54845 237 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 CDH8P55286 799 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 TNNC1P63316 161 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 SLC7A9P82251 487 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 FOXK1P85037 733 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 ZXDBP98169 803 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 SATB1Q01826 763 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 USP4Q13107 963 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 TRPC3Q13507 836 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 LRRC32Q14392 662 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 MDH1BQ5I0G3 518 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 SNX30Q5VWJ9 437 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 DENND5BQ6ZUT9 1274 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 SCN4BQ8IWT1 228 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 FSIP1Q8NA03 581 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 OR6B3Q8NGW1 331 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 SPATA20Q8TB22 786 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 ATRIPQ8WXE1 791 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 ZNF518BQ9C0D4 1074 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 ELOVL4Q9GZR5 314 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 DPEP3Q9H4B8 488 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 RBM12Q9NTZ6 932 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 EHD2Q9NZN4 543 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 DMDP11532 3685 aa10.36□□□□□ -0.75
TMEM39A-210ENST00000490099 C2orf78A6NCI8 922 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 A8MXQ7 604 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 CHURC1-FNTBB4DL54 471 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 F8VP50 259 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 AKAP3O75969 853 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 KIF20AO95235 890 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 OAS1P00973 400 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 ARSAP15289 507 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 GRIK1P39086 918 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 PDE6CP51160 858 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 CYP27A1Q02318 531 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 PPP2R5DQ14738 602 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 MTF1Q14872 753 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 PON2Q15165 354 aa10.35□□□□□ -0.75
TMEM39A-210ENST00000490099 ZNF699Q32M78 642 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms