RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 Q4G0T1 1027 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 SNX31Q8N9S9 440 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 RIN2Q8WYP3 895 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 POLG2Q9UHN1 485 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 MROH2AA6NES4 1674 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 GPR75-ASB3A0A0A6YYF3 556 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 NMT2O60551 498 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 NMT1P30419 496 aaKnown RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 RENBPP51606 427 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 RPL10AP62906 217 aaKnown RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TWF1Q12792 350 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 LRRC14Q15048 493 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ARMC6Q6NXE6 501 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CINPQ9BW66 212 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TBC1D13Q9NVG8 400 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 OGTO15294 1046 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CYP11B2P19099 503 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CDK7P50613 346 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ITGA8P53708 1063 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 MTMR2Q13614 643 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 RNF180Q86T96 592 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 RMND5BQ96G75 393 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TSEN34Q9BSV6 310 aaKnown RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PCMTD2Q9NV79 361 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PNMA8CA0A1B0GUJ8 204 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ESYT3A0FGR9 886 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 RAD51CO43502 376 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CST8O60676 142 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 KATNA1O75449 491 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 JAK1P23458 1154 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CHRNB3Q05901 458 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CCDC85BQ15834 202 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 SEL1L3Q68CR1 1132 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 FBXO33Q7Z6M2 555 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TBC1D16Q8TBP0 767 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CPA5Q8WXQ8 436 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 WNK4Q96J92 1243 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ZNF512Q96ME7 567 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ZSWIM1Q9BR11 485 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 AHSPQ9NZD4 102 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TMCC3Q9ULS5 477 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PGK2P07205 417 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 GUCY1A2P33402 732 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ANKMY2Q8IV38 441 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 B2RBV5 119 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 TMEM114B3SHH9 223 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PSMC3P17980 439 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 RAD23AP54725 363 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 TTC33Q6PID6 262 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 GPRC5AQ8NFJ5 357 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 VPS33AQ96AX1 596 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 EHD4Q9H223 541 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 L2HGDHQ9H9P8 463 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 C15orf38-AP3S2A0A0A6YYH1 394 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 NR3C2P08235 984 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ARPINQ7Z6K5 226 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 RAD21L1Q9H4I0 556 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 AGPAT3Q9NRZ7 376 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 FAM170AA1A519 330 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 DTNBO60941 627 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 MYL4P12829 197 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 GCLCP48506 637 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SLC29A2Q14542 456 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 CCNG2Q16589 344 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ZCCHC8Q6NZY4 707 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 GPR141Q7Z602 305 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 HERC6Q8IVU3 1022 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 DNERQ8NFT8 737 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 IL17RAQ96F46 866 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 TMEM237Q96Q45 408 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 RBM12Q9NTZ6 932 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SORCS3Q9UPU3 1222 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ARHGEF28Q8N1W1 1705 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ELAVL2Q12926 359 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PAPD7Q5XG87 772 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 EFCAB12Q6NXP0 572 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 AADATQ8N5Z0 425 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 RXFP1Q9HBX9 757 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 AFF4Q9UHB7 1163 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SLC25A13Q9UJS0 675 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 DBR1Q9UK59 544 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 OPLAHO14841 1288 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 GUCA1AP43080 201 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 CTCFP49711 727 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 LONRF1Q17RB8 773 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 CLEC16AQ2KHT3 1053 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 CYP4Z2PQ8N1L4 340 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 LZTR1Q8N653 840 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 DDHD1Q8NEL9 900 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 MS4A14Q96JA4 679 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 MLXIPLQ9NP71 852 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms