RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 KLF8O95600 359 aaPredicted RBP14.95□□□□□ -0.02
VARS-227ENST00000489979 CYP17A1P05093 508 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 KRT19P08727 400 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 ENGP17813 658 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 PCSK1P29120 753 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 TIE1P35590 1138 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 P2RY2P41231 377 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 PTGER3P43115 390 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 MAGEA11P43364 429 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 SLC6A11P48066 632 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 PDE6CP51160 858 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 KCNA1Q09470 495 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 ACAP1Q15027 740 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 FAM171BQ6P995 826 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 FILIP1Q7Z7B0 1213 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 SYT12Q8IV01 421 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 BRSK2Q8IWQ3 736 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 TOP6BLQ8N6T0 577 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 LRRC52Q8N7C0 313 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 KRI1Q8N9T8 703 aaKnown RBP14.95□□□□□ -0.02
VARS-227ENST00000489979 CXorf38Q8TB03 319 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 SPATA18Q8TC71 538 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 WHAMMQ8TF30 809 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 CACTINQ8WUQ7 758 aaKnown RBP14.95□□□□□ -0.02
VARS-227ENST00000489979 HVCN1Q96D96 273 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 SAAL1Q96ER3 474 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 SPACA7Q96KW9 195 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 GDAP2Q9NXN4 497 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 TRPM5Q9NZQ8 1165 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 MBD1Q9UIS9 605 aaPredicted RBP14.95□□□□□ -0.02
VARS-227ENST00000489979 NEUROG3Q9Y4Z2 214 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 PLXND1Q9Y4D7 1925 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 ATXN2Q99700 1313 aaKnown RBP14.94□□□□□ -0.02
VARS-227ENST00000489979 CEP192Q8TEP8 1941 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 SPAARA0A1B0GVQ0 90 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 MYMKA6NI61 221 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 H3BQV1 296 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 GABRDO14764 452 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 ATP2C2O75185 946 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 USP46P62068 366 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 PSMC1P62191 440 aaKnown RBP14.94□□□□□ -0.02
VARS-227ENST00000489979 RBP5P82980 135 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 RING1Q06587 406 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 MESP2Q0VG99 397 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 DHCR24Q15392 516 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 SOWAHAQ2M3V2 549 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 EMC10Q5UCC4 262 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 LRSAM1Q6UWE0 723 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 DYMQ7RTS9 669 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 ADGRG2Q8IZP9 1017 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 IL17RCQ8NAC3 791 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 MYLPFQ96A32 169 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 SPATA17Q96L03 361 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 PNKPQ96T60 521 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 KIF2CQ99661 725 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 STRA6Q9BX79 667 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 POLMQ9NP87 494 aaPredicted RBP14.94□□□□□ -0.02
VARS-227ENST00000489979 RBAKQ9NYW8 714 aaPredicted RBP14.94□□□□□ -0.02
VARS-227ENST00000489979 BCCIPQ9P287 314 aaKnown RBP eCLIP14.94□□□□□ -0.02
VARS-227ENST00000489979 MAGEC2Q9UBF1 373 aaPredicted RBP14.94□□□□□ -0.02
VARS-227ENST00000489979 SIX4Q9UIU6 781 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 KLK13Q9UKR3 277 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 ITGA11Q9UKX5 1188 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 LHX6Q9UPM6 363 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 MSRB2Q9Y3D2 182 aa14.94□□□□□ -0.02
VARS-227ENST00000489979 DSPP15924 2871 aaKnown RBP14.94□□□□□ -0.02
VARS-227ENST00000489979 GOLGA8IPA6NC78 632 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 GOLGA8JA6NMD2 632 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 SCAMP3O14828 347 aaKnown RBP14.93□□□□□ -0.02
VARS-227ENST00000489979 KAT7O95251 611 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 APODP05090 189 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 CHRM1P11229 460 aaPredicted RBP14.93□□□□□ -0.02
VARS-227ENST00000489979 PFKLP17858 780 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 BDNFP23560 247 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 LMO2P25791 158 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 DDIT3P35638 169 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 LONP1P36776 959 aaKnown RBP14.93□□□□□ -0.02
VARS-227ENST00000489979 GRIK1P39086 918 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 SIM1P81133 766 aaPredicted RBP14.93□□□□□ -0.02
VARS-227ENST00000489979 SLC7A9P82251 487 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 MAP7D1Q3KQU3 841 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 LYSMD4Q5XG99 296 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 LMBRD2Q68DH5 695 aaPredicted RBP14.93□□□□□ -0.02
VARS-227ENST00000489979 SLC23A3Q6PIS1 610 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 DENND5BQ6ZUT9 1274 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 PIP4P1Q86T03 277 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 C12orf40Q86WS4 652 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 HMGB4Q8WW32 186 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 ACCSQ96QU6 501 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 SYT15Q9BQS2 421 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 MTMR12Q9C0I1 747 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 RNF38Q9H0F5 515 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 MRPL44Q9H9J2 332 aaKnown RBP14.93□□□□□ -0.02
VARS-227ENST00000489979 ZDHHC4Q9NPG8 344 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 FSCN3Q9NQT6 498 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 SMPD4Q9NXE4 827 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 TBC1D7Q9P0N9 293 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 EXOC7Q9UPT5 735 aa14.93□□□□□ -0.02
VARS-227ENST00000489979 LAMA5O15230 3695 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms