RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 CCDC65Q8IXS2 484 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 PDILTQ8N807 584 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 TSTD1Q8NFU3 115 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 USP33Q8TEY7 942 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 PCED1BQ96HM7 432 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 USP28Q96RU2 1077 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 HSPBP1Q9NZL4 362 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 TRPM5Q9NZQ8 1165 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 INVSQ9Y283 1065 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 CFAP47Q6ZTR5 3102 aa16.96■□□□□ 0.31
PLOD3-216ENST00000489927 USP24Q9UPU5 2620 aa16.96■□□□□ 0.3
PLOD3-216ENST00000489927 KIAA1549LQ6ZVL6 1849 aa16.96■□□□□ 0.3
PLOD3-216ENST00000489927 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
PLOD3-216ENST00000489927 K7EQS6 105 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 LEFTY2O00292 366 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 KCNK5O95279 499 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 CAVIN2O95810 425 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 ANXA13P27216 316 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 GBP1P32455 592 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 HOXD13P35453 343 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 SEC13P55735 322 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 SLC39A14Q15043 492 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 SURF1Q15526 300 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 MAPRE1Q15691 268 aaKnown RBP16.95■□□□□ 0.3
PLOD3-216ENST00000489927 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 WDR49Q8IV35 697 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 CCDC26Q8TAB7 109 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 MYCBPAPQ8TBZ2 947 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 CEP295NLQ96MC4 621 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 MMS19Q96T76 1030 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 MRPL45Q9BRJ2 306 aaKnown RBP16.95■□□□□ 0.3
PLOD3-216ENST00000489927 EDEM2Q9BV94 578 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 TTLL2Q9BWV7 592 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 TPSD1Q9BZJ3 242 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
PLOD3-216ENST00000489927 ANAPC1Q9H1A4 1944 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 MYO16Q9Y6X6 1858 aa16.95■□□□□ 0.3
PLOD3-216ENST00000489927 ZNF840PA6NDX5 716 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 PFKLP17858 780 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 NOP14P78316 857 aaKnown RBP16.94■□□□□ 0.3
PLOD3-216ENST00000489927 SHC2P98077 582 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 USP39Q53GS9 565 aaKnown RBP16.94■□□□□ 0.3
PLOD3-216ENST00000489927 MDH1BQ5I0G3 518 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 ANO7Q6IWH7 933 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 STXBP4Q6ZWJ1 553 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 TRAPPC11Q7Z392 1133 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 FILIP1Q7Z7B0 1213 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 RNF38Q9H0F5 515 aa16.94■□□□□ 0.3
PLOD3-216ENST00000489927 CNOT1A5YKK6 2376 aaKnown RBP16.93■□□□□ 0.3
PLOD3-216ENST00000489927 FRYQ5TBA9 3013 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 LNP1A1A4G5 178 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 F8VP50 259 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 SCAMP3O14828 347 aaKnown RBP16.93■□□□□ 0.3
PLOD3-216ENST00000489927 TRIM66O15016 1216 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 CST3P01034 146 aaPredicted RBP16.93■□□□□ 0.3
PLOD3-216ENST00000489927 CYP17A1P05093 508 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 SLC7A9P82251 487 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 PMS2CLQ68D20 193 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 PSAPL1Q6NUJ1 521 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 HS2ST1Q7LGA3 356 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 RASSF3Q86WH2 238 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 ADGRG2Q8IZP9 1017 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 CCDC33Q8N5R6 958 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 C8orf48Q96LL4 319 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 TNMDQ9H2S6 317 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 KIAA1586Q9HCI6 787 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 SMPD4Q9NXE4 827 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 EHD2Q9NZN4 543 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 CPQQ9Y646 472 aa16.93■□□□□ 0.3
PLOD3-216ENST00000489927 HELZP42694 1942 aaKnown RBP16.93■□□□□ 0.3
PLOD3-216ENST00000489927 ASPMQ8IZT6 3477 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 C4orf47A7E2U8 309 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 TACC1O75410 805 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 OLFM2O95897 454 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 ABL1P00519 1130 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 DLATP10515 647 aaKnown RBP16.92■□□□□ 0.3
PLOD3-216ENST00000489927 BCKDHBP21953 392 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 GNL1P36915 607 aaPredicted RBP16.92■□□□□ 0.3
PLOD3-216ENST00000489927 PPP3CCP48454 512 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 CACNA2D1P54289 1103 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 E2F4Q16254 413 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 SNRNP35Q16560 246 aaKnown RBP16.92■□□□□ 0.3
PLOD3-216ENST00000489927 C11orf74Q86VG3 221 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 SFTPA1Q8IWL2 248 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 RDH13Q8NBN7 331 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 MDGA1Q8NFP4 955 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 CNOT6LQ96LI5 555 aaKnown RBP16.92■□□□□ 0.3
PLOD3-216ENST00000489927 TRIM9Q9C026 710 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 SNX25Q9H3E2 840 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 DPEP3Q9H4B8 488 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 TMEM30AQ9NV96 361 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 KBTBD4Q9NVX7 518 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 MMP17Q9ULZ9 603 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 MTMR6Q9Y217 621 aa16.92■□□□□ 0.3
PLOD3-216ENST00000489927 TGFB1I1O43294 461 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 OAS1P00973 400 aaKnown RBP16.91■□□□□ 0.3
PLOD3-216ENST00000489927 HNRNPLP14866 589 aaKnown RBP eCLIP16.91■□□□□ 0.3
PLOD3-216ENST00000489927 TNNI1P19237 187 aa16.91■□□□□ 0.3
PLOD3-216ENST00000489927 SLC6A11P48066 632 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms