RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 SPATA17Q96L03 361 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 ZNF560Q96MR9 790 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 USP28Q96RU2 1077 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 CBWD1Q9BRT8 395 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 TTLL2Q9BWV7 592 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 PDE11AQ9HCR9 933 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 OLFML3Q9NRN5 406 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
SMG5-205ENST00000489907 SEL1LQ9UBV2 794 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 ARHGAP26Q9UNA1 814 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 INVSQ9Y283 1065 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 SRPRBQ9Y5M8 271 aaKnown RBP8.73□□□□□ -1.01
SMG5-205ENST00000489907 SNX9Q9Y5X1 595 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 CLIC4Q9Y696 253 aa8.73□□□□□ -1.01
SMG5-205ENST00000489907 MYO18AQ92614 2054 aaKnown RBP8.73□□□□□ -1.01
SMG5-205ENST00000489907 AKAP13Q12802 2813 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 TRAV19A0A0A6YYK7 116 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 GOLGA8IPA6NC78 632 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 GOLGA8JA6NMD2 632 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 C1QTNF9BB2RNN3 333 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 HUS1O60921 280 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 TBCAO75347 108 aaKnown RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 RHOBTB1O94844 696 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 LDHAP00338 332 aaKnown RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 CST3P01034 146 aaPredicted RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 KRT18P05783 430 aaKnown RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 C1QTNF9P0C862 333 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 HDCP19113 662 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 KIR2DL1P43626 348 aaPredicted RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 SLC6A11P48066 632 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 LHX1P48742 406 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 DGKEP52429 567 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 CACNA2D1P54289 1103 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 IRX4P78413 519 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 MYL7Q01449 175 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 CREB5Q02930 508 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 SLC39A14Q15043 492 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 CRY1Q16526 586 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 PSAPL1Q6NUJ1 521 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 RHBDF2Q6PJF5 856 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 PHTF2Q8N3S3 785 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 KDF1Q8NAX2 398 aaPredicted RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 GLIS3Q8NEA6 775 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 ATP2A3Q93084 1043 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 CLIC6Q96NY7 704 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 ACCSQ96QU6 501 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 ANP32EQ9BTT0 268 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 EDEM2Q9BV94 578 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 TPSD1Q9BZJ3 242 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 GZF1Q9H116 711 aaPredicted RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 MRPL44Q9H9J2 332 aaKnown RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 TMEM74BQ9NUR3 256 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 INTS13Q9NVM9 706 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 RBAKQ9NYW8 714 aaPredicted RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 TBC1D7Q9P0N9 293 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 STK17AQ9UEE5 414 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 ITGA11Q9UKX5 1188 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 HCN2Q9UL51 889 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 MMP17Q9ULZ9 603 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 PCNX2A6NKB5 2137 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 ASCC3Q8N3C0 2202 aaKnown RBP8.72□□□□□ -1.01
SMG5-205ENST00000489907 PCDH15Q96QU1 1955 aa8.72□□□□□ -1.01
SMG5-205ENST00000489907 PI4KAP42356 2102 aa8.71□□□□□ -1.01
SMG5-205ENST00000489907 ZNF840PA6NDX5 716 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 LEFTY2O00292 366 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 ADAM23O75077 832 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 BMP15O95972 392 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 OAS1P00973 400 aaKnown RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 CAPNS1P04632 268 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 CYP17A1P05093 508 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 CKMP06732 381 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 GAP43P17677 238 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 PFKLP17858 780 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 CSRP1P21291 193 aaKnown RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 WARSP23381 471 aaKnown RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 BDNFP23560 247 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 NOP14P78316 857 aaKnown RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 SLC7A9P82251 487 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 RBP5P82980 135 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 C2orf27AQ580R0 203 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 EMC10Q5UCC4 262 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 LMBRD2Q68DH5 695 aaPredicted RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 VSTM1Q6UX27 236 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 C12orf40Q86WS4 652 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 SPATA2LQ8IUW3 424 aaPredicted RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 ADGRF2Q8IZF7 708 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 KIAA1958Q8N8K9 716 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 IL17RCQ8NAC3 791 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 MDGA1Q8NFP4 955 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 CACTINQ8WUQ7 758 aaKnown RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 GATA6Q92908 595 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 PCED1BQ96HM7 432 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 ZFRQ96KR1 1074 aaKnown RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 CNOT6LQ96LI5 555 aaKnown RBP8.71□□□□□ -1.02
SMG5-205ENST00000489907 CEP295NLQ96MC4 621 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 FNBP1Q96RU3 617 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 MTMR12Q9C0I1 747 aa8.71□□□□□ -1.02
SMG5-205ENST00000489907 PCIF1Q9H4Z3 704 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms