RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 BEST1O76090 585 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 PDGFRBP09619 1106 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 FAM163BP0C2L3 166 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 TNNI1P19237 187 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 SYKP43405 635 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 INCA1Q0VD86 236 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 MYO1EQ12965 1108 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 PSMD2Q13200 908 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 MTF1Q14872 753 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 PON2Q15165 354 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 WDR72Q3MJ13 1102 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 TMEM196Q5HYL7 178 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 FAM35AQ86V20 835 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 RALGPS2Q86X27 583 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-204ENST00000489898 SPATA2LQ8IUW3 424 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-204ENST00000489898 CEP57L1Q8IYX8 460 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 GUF1Q8N442 669 aaKnown RBP12.61□□□□□ -0.39
SRSF4-204ENST00000489898 DCLK2Q8N568 766 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 TMC2Q8TDI7 906 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 WHAMMQ8TF30 809 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 C8orf48Q96LL4 319 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 CEP295NLQ96MC4 621 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 NELL2Q99435 816 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 IER2Q9BTL4 223 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 EBF3Q9H4W6 596 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 POLR3BQ9NW08 1133 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-204ENST00000489898 MAGED2Q9UNF1 606 aaPredicted RBP12.61□□□□□ -0.39
SRSF4-204ENST00000489898 PCDHGA2Q9Y5H1 932 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 ZNF840PA6NDX5 716 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 HHLA1C9JL84 531 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 GREM1O60565 184 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 LMNAP02545 664 aaKnown RBP12.6□□□□□ -0.39
SRSF4-204ENST00000489898 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ZDHHC11BP0C7U3 371 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
SRSF4-204ENST00000489898 RFX1P22670 979 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ATICP31939 592 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
SRSF4-204ENST00000489898 RPL10AP62906 217 aaKnown RBP12.6□□□□□ -0.39
SRSF4-204ENST00000489898 FAM160A1Q05DH4 1040 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ORC1Q13415 861 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 NCOA4Q13772 614 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ZNF699Q32M78 642 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ARHGAP15Q53QZ3 475 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 SCARA5Q6ZMJ2 495 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 GPRIN1Q7Z2K8 1008 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 SFTPA1Q8IWL2 248 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ARL14EPQ8N8R7 260 aaPredicted RBP12.6□□□□□ -0.39
SRSF4-204ENST00000489898 GOLGA5Q8TBA6 731 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 TAS1R2Q8TE23 839 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 WBP2Q969T9 261 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 KCNK16Q96T55 309 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 RNF38Q9H0F5 515 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 C8orf33Q9H7E9 229 aaPredicted RBP12.6□□□□□ -0.39
SRSF4-204ENST00000489898 LMAN1LQ9HAT1 526 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 PARD6AQ9NPB6 346 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ZSCAN32Q9NX65 697 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ZMYM5Q9UJ78 669 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 THADAQ6YHU6 1953 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 PCDH15Q96QU1 1955 aa12.6□□□□□ -0.39
SRSF4-204ENST00000489898 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 TRDMT1O14717 391 aaKnown RBP12.59□□□□□ -0.39
SRSF4-204ENST00000489898 LAMTOR5O43504 91 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 ZNF202O95125 648 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 HLA-DRAP01903 254 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 BMP6P22004 513 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 GJA4P35212 333 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 OPRD1P41143 372 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 SLC7A9P82251 487 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 PLCB2Q00722 1185 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 CSTF1Q05048 431 aaKnown RBP12.59□□□□□ -0.39
SRSF4-204ENST00000489898 ENPEPQ07075 957 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 PNOCQ13519 176 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 RUNX3Q13761 415 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 ITPRIPL2Q3MIP1 535 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 DENND5BQ6ZUT9 1274 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 PHTF2Q8N3S3 785 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 SEMA4DQ92854 862 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 ERCC4Q92889 916 aaPredicted RBP12.59□□□□□ -0.39
SRSF4-204ENST00000489898 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
SRSF4-204ENST00000489898 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 SMOQ99835 787 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 ELOVL4Q9GZR5 314 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 SEMA4AQ9H3S1 761 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 GKN1Q9NS71 199 aa12.59□□□□□ -0.39
SRSF4-204ENST00000489898 NXF1Q9UBU9 619 aaKnown RBP12.59□□□□□ -0.39
SRSF4-204ENST00000489898 SMG5Q9UPR3 1016 aaKnown RBP12.59□□□□□ -0.39
SRSF4-204ENST00000489898 MAPK8IP1Q9UQF2 711 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms