RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ABLIM1O14639 778 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 SMAD7O15105 426 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 OFD1O75665 1012 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 DEXIO95424 95 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 TDP2O95551 362 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 CXCL14O95715 111 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 GALTP07902 379 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 CTSAP10619 480 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 AVPR2P30518 371 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 HOXA11P31270 313 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 ALDH7A1P49419 539 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 DNM2P50570 870 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 POLGP54098 1239 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 LINC00310P59036 64 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 NLRP5P59047 1200 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 PSMC5P62195 406 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 AMPD2Q01433 879 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 ITIH3Q06033 890 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 SSRP1Q08945 709 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 SMC1AQ14683 1233 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 NCAPHQ15003 741 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 EEF1DP3Q658K8 133 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 MIER3Q7Z3K6 550 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 MRPL10Q7Z7H8 261 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 DDX53Q86TM3 631 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 ZNF410Q86VK4 478 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 TMEM173Q86WV6 379 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 CILP2Q8IUL8 1156 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 BLIDQ8IZY5 108 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 SLC22A17Q8WUG5 538 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 PPP1R14AQ96A00 147 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 IGSF21Q96ID5 467 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 FAM20AQ96MK3 541 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 AIFM3Q96NN9 605 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 SH2D3AQ9BRG2 576 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 FDXACB1Q9BRP7 624 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 VN1R3Q9BXE9 311 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 MRPL9Q9BYD2 267 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 INO80BQ9C086 356 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 ZBP1Q9H171 429 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 DHX33Q9H6R0 707 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 NRDE2Q9H7Z3 1164 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 KCNMB3Q9NPA1 279 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 ENTPD7Q9NQZ7 604 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 ACTR10Q9NZ32 417 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 SUCLA2Q9P2R7 463 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 TCEAL9Q9UHQ7 104 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 CDH22Q9UJ99 828 aa7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 RIF1Q5UIP0 2472 aaKnown RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 PTPRZ1P23471 2315 aaPredicted RBP7.11□□□□□ -1.27
PRPF40A-210ENST00000489741 C2CD4DB7Z1M9 353 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 AURKAO14965 403 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 CHMP2AO43633 222 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 SLC37A4O43826 429 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 NUAK1O60285 661 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 B4GALT3O60512 393 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 REC8O95072 547 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 SRGAP2BP0DMP2 458 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 VIPR1P32241 457 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 SEPHS1P49903 392 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 VCPP55072 806 aaKnown RBP7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 NPEPPSP55786 919 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 PPP2R5CQ13362 524 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 MTERF2Q49AM1 385 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 NOMO2Q5JPE7 1267 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 UBXN11Q5T124 520 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 LARP1BQ659C4 914 aaKnown RBP7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 PPP4R3AQ6IN85 833 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 ZDHHC14Q8IZN3 488 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 VPS52Q8N1B4 723 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 ARHGEF39Q8N4T4 335 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 RNF169Q8NCN4 708 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 KREMEN2Q8NCW0 462 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 HAS1Q92839 578 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 LPPQ93052 612 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 RCC1LQ96I51 464 aaKnown RBP7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 RIPOR3Q96MK2 946 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 NECTIN4Q96NY8 510 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 PHF20Q9BVI0 1012 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 APOL5Q9BWW9 433 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 POMKQ9H5K3 350 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 MINDY3Q9H8M7 445 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 TNFRSF12AQ9NP84 129 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 CYP26B1Q9NR63 512 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 TBC1D13Q9NVG8 400 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 WRAP73Q9P2S5 460 aaPredicted RBP7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 APEX2Q9UBZ4 518 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 SUSD2Q9UGT4 822 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 BACE2Q9Y5Z0 518 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 FNDC1Q4ZHG4 1894 aaPredicted RBP7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 EVPLQ92817 2033 aa7.1□□□□□ -1.27
PRPF40A-210ENST00000489741 TBX3O15119 743 aa7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 INPPL1O15357 1258 aa7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 DDHD2O94830 711 aa7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 PDGFBP01127 241 aaPredicted RBP7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 EPCAMP16422 314 aa7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 SFPQP23246 707 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 MTHFRP42898 656 aa7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 QARSP47897 775 aaKnown RBP7.09□□□□□ -1.27
PRPF40A-210ENST00000489741 SLC11A1P49279 550 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms