RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 RPP40O75818 363 aaKnown RBP12.57□□□□□ -0.4
ACTN4-206ENST00000489451 EPN2O95208 641 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 OLFM2O95897 454 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 CKMP06732 381 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 PDIA4P13667 645 aaKnown RBP12.57□□□□□ -0.4
ACTN4-206ENST00000489451 PCSK1P29120 753 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 OPRD1P41143 372 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 MESP2Q0VG99 397 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 PLA2G2CQ5R387 149 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 CNNM4Q6P4Q7 775 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 CEP68Q76N32 757 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 DPH6Q7L8W6 267 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 TRAPPC11Q7Z392 1133 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 WDR49Q8IV35 697 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 SFTPA1Q8IWL2 248 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 RPLP0P6Q8NHW5 317 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 ZNF507Q8TCN5 953 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 SCFD1Q8WVM8 642 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 SNX21Q969T3 373 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 TTLL2Q9BWV7 592 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 RNF38Q9H0F5 515 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 ARRDC1-AS1Q9H2J1 176 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 DUS2Q9NX74 493 aaKnown RBP12.57□□□□□ -0.4
ACTN4-206ENST00000489451 TFIP11Q9UBB9 837 aaKnown RBP12.57□□□□□ -0.4
ACTN4-206ENST00000489451 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 ARHGAP26Q9UNA1 814 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 ZZEF1O43149 2961 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 KIAA0391O15091 583 aaKnown RBP12.56□□□□□ -0.4
ACTN4-206ENST00000489451 CLIC2O15247 247 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 SPTLC2O15270 562 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 EIF3DO15371 548 aaKnown RBP eCLIP12.56□□□□□ -0.4
ACTN4-206ENST00000489451 PPP6R2O75170 966 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 USP17L7P0C7H9 530 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 DRD1P21728 446 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 RING1Q06587 406 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 SNRNP35Q16560 246 aaKnown RBP12.56□□□□□ -0.4
ACTN4-206ENST00000489451 DUOXA2Q1HG44 320 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 IL31Q6EBC2 164 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 CC2D1AQ6P1N0 951 aaPredicted RBP12.56□□□□□ -0.4
ACTN4-206ENST00000489451 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 CPA6Q8N4T0 437 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 RDH13Q8NBN7 331 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 CD101Q93033 1021 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 DHX58Q96C10 678 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 ZC3H10Q96K80 434 aaKnown RBP12.56□□□□□ -0.4
ACTN4-206ENST00000489451 XYLT2Q9H1B5 865 aa12.56□□□□□ -0.4
ACTN4-206ENST00000489451 ZSCAN16Q9H4T2 348 aaPredicted RBP12.56□□□□□ -0.4
ACTN4-206ENST00000489451 NUP205Q92621 2012 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 ASH1LQ9NR48 2969 aaKnown RBP12.55□□□□□ -0.4
ACTN4-206ENST00000489451 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 ZNF840PA6NDX5 716 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 F8VP50 259 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 K7EQS6 105 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 SCAMP3O14828 347 aaKnown RBP12.55□□□□□ -0.4
ACTN4-206ENST00000489451 DCLK1O15075 740 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 TNNC2P02585 160 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 ZNF806P0C7X5 589 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 HNRNPLP14866 589 aaKnown RBP eCLIP12.55□□□□□ -0.4
ACTN4-206ENST00000489451 HDCP19113 662 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 IFNAR2P48551 515 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
ACTN4-206ENST00000489451 ASIC1P78348 528 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 MYO1EQ12965 1108 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 PSMD6Q15008 389 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 STK38Q15208 465 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 SURF1Q15526 300 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 PLK5Q496M5 336 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 MDH1BQ5I0G3 518 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 FAM26FQ5R3K3 315 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 TCEAL6Q6IPX3 200 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 C4orf50Q6ZRC1 276 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 SYT13Q7L8C5 426 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 NELFCDQ8IXH7 590 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 TTC16Q8NEE8 873 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 MYCBPAPQ8TBZ2 947 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 TCEAL3Q969E4 200 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 ELMO3Q96BJ8 720 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 CGRRF1Q99675 332 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 C7orf25Q9BPX7 421 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 ZNF518BQ9C0D4 1074 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 DUSP15Q9H1R2 295 aaPredicted RBP12.55□□□□□ -0.4
ACTN4-206ENST00000489451 BLZF1Q9H2G9 400 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 MAGEC2Q9UBF1 373 aaPredicted RBP12.55□□□□□ -0.4
ACTN4-206ENST00000489451 SLC8A2Q9UPR5 921 aa12.55□□□□□ -0.4
ACTN4-206ENST00000489451 TNRC6BQ9UPQ9 1833 aaKnown RBP12.55□□□□□ -0.4
ACTN4-206ENST00000489451 LEFTY2O00292 366 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CLDN5O00501 218 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 ATG13O75143 517 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 TACC1O75410 805 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 AKAP3O75969 853 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 YEATS4O95619 227 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 OAS1P00973 400 aaKnown RBP12.54□□□□□ -0.4
ACTN4-206ENST00000489451 CYP17A1P05093 508 aa12.54□□□□□ -0.4
ACTN4-206ENST00000489451 DLATP10515 647 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms