RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 MISP3Q96FF7 219 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 FGD4Q96M96 766 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 ACO2Q99798 780 aaKnown RBP7.07□□□□□ -1.28
PDCD4-209ENST00000489049 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDCD4-209ENST00000489049 ATXN3LQ9H3M9 355 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 ABHD16BQ9H3Z7 469 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 BCAS3Q9H6U6 928 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 PIDD1Q9HB75 910 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 GBA2Q9HCG7 927 aaPredicted RBP7.07□□□□□ -1.28
PDCD4-209ENST00000489049 MRPL47Q9HD33 250 aaKnown RBP7.07□□□□□ -1.28
PDCD4-209ENST00000489049 TXNRD2Q9NNW7 524 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.07□□□□□ -1.28
PDCD4-209ENST00000489049 ZNF446Q9NWS9 450 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 TMEM59LQ9UK28 342 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 FZD1Q9UP38 647 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 TNFSF13BQ9Y275 285 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 STXBP5LQ9Y2K9 1186 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 Q9Y3F1 56 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 OTOFQ9HC10 1997 aa7.07□□□□□ -1.28
PDCD4-209ENST00000489049 CCDC66A2RUB6 948 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 GOLGA8IPA6NC78 632 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 GOLGA8JA6NMD2 632 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 KCNK3O14649 394 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ZEB2O60315 1214 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 B4GALT4O60513 344 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 KPNA6O60684 536 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 TBC1D8O95759 1140 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 HLA-DRAP01903 254 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 TNNC2P02585 160 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 PRKCBP05771 671 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 RHOXF2BP0C7M4 288 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 DLATP10515 647 aaKnown RBP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 MCF2P10911 925 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 P4HA1P13674 534 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 PROZP22891 400 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ATICP31939 592 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 CETN2P41208 172 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 PIK3CAP42336 1068 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 MATR3P43243 847 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 MAPK8P45983 427 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 AARSP49588 968 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ZNF157P51786 506 aaPredicted RBP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 EPHB4P54760 987 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ID3Q02535 119 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 TAP1Q03518 808 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ARHGAP1Q07960 439 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 PTP4A2Q12974 167 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 CDK5R2Q13319 367 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 GRM2Q14416 872 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 GRB14Q14449 540 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 PLCL1Q15111 1095 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ENOX2Q16206 610 aaKnown RBP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 LY6KQ17RY6 165 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 DUSP28Q4G0W2 176 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 SPDYCQ5MJ68 293 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 C8orf74Q6P047 294 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 NFRKBQ6P4R8 1299 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 GJB7Q6PEY0 223 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 MPZL3Q6UWV2 235 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 PLEKHH3Q7Z736 793 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 NT5DC3Q86UY8 548 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ZNF410Q86VK4 478 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ARHGEF19Q8IW93 802 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 RPUSD2Q8IZ73 545 aaKnown RBP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 NOA1Q8NC60 698 aaKnown RBP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 TAS1R2Q8TE23 839 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 COG1Q8WTW3 980 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 SEMA4DQ92854 862 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 CAVIN3Q969G5 261 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 CAPZA3Q96KX2 299 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 KREMEN1Q96MU8 473 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 FANCD2OSQ96PS1 177 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 RHOXF2Q9BQY4 288 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 TCHPQ9BT92 498 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 KIFC3Q9BVG8 833 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 TARS2Q9BW92 718 aaKnown RBP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 UBXN6Q9BZV1 441 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 ASB7Q9H672 318 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 HOMER3Q9NSC5 361 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 CTTNBP2NLQ9P2B4 639 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 FEZ2Q9UHY8 353 aaPredicted RBP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 MTUS1Q9ULD2 1270 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDCD4-209ENST00000489049 SCINQ9Y6U3 715 aa7.06□□□□□ -1.28
PDCD4-209ENST00000489049 LCTP09848 1927 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 MANSC4A6NHS7 340 aaPredicted RBP7.05□□□□□ -1.28
PDCD4-209ENST00000489049 TMCO5BA8MYB1 307 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 TISP43B9A030 160 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 BTBD19C9JJ37 291 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 NDC80O14777 642 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 CEP104O60308 925 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 OPA1O60313 960 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 BUB1BO60566 1050 aaPredicted RBP7.05□□□□□ -1.28
PDCD4-209ENST00000489049 SRGAP2O75044 1071 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 LRRN2O75325 713 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 ERLIN2O94905 339 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 FTCDO95954 541 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 ASS1P00966 412 aaKnown RBP7.05□□□□□ -1.28
PDCD4-209ENST00000489049 PGK2P07205 417 aa7.05□□□□□ -1.28
PDCD4-209ENST00000489049 FAM87AP0C7U9 286 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms