RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 FOSP01100 380 aaPredicted RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 LMNAP02545 664 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 CD1AP06126 327 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 FXR1P51114 621 aaKnown RBP eCLIP3.33□□□□□ -1.88
CALD1-221ENST00000489019 SEC24CP53992 1094 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 USP14P54578 494 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 EXOSC10Q01780 885 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 TAP1Q03518 808 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 MTX1Q13505 466 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 GCKRQ14397 625 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 SPDYE7PQ495Y7 208 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 PABPC1LQ4VXU2 614 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 UTP14CQ5TAP6 766 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 ARMC6Q6NXE6 501 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 OLFML1Q6UWY5 402 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 CWC27Q6UX04 472 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 UNC5CLQ8IV45 518 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 IL17RDQ8NFM7 739 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 NLGN4YQ8NFZ3 816 aaPredicted RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 PLBD2Q8NHP8 589 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 NSUN6Q8TEA1 469 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 EVI5LQ96CN4 794 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 BOD1Q96IK1 185 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 COQ10AQ96MF6 247 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 PNKPQ96T60 521 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 VRK1Q99986 396 aaPredicted RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 FSD1Q9BTV5 496 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 SYNPO2LQ9H987 977 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 UNKLQ9H9P5 680 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 ALG13Q9NP73 1137 aaKnown RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 TMOD3Q9NYL9 352 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 NOX1Q9Y5S8 564 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 SALL3Q9BXA9 1300 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 PLEKHG2Q9H7P9 1386 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 HEG1Q9ULI3 1381 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 LMTK3Q96Q04 1460 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 C5P01031 1676 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 SIPA1L3O60292 1781 aaPredicted RBP3.33□□□□□ -1.88
CALD1-221ENST00000489019 COL18A1P39060 1754 aa3.33□□□□□ -1.88
CALD1-221ENST00000489019 LRRC14BA6NHZ5 514 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 NT5C1B-RDH14C9J2C7 533 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 EPB41L2O43491 1005 aaKnown RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 SLC43A1O75387 559 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 RHOBTB3O94955 611 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 IGKV5-2P06315 115 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 HKR1P10072 659 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 ZKSCAN1P17029 563 aaPredicted RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 BMP5P22003 454 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 CCND1P24385 295 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 HSPA4P34932 840 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 PLA2G5P39877 138 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 MPLP40238 635 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 RECQLP46063 649 aaPredicted RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 CLK3P49761 638 aaKnown RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 RHBDL3P58872 404 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 NANOS3P60323 173 aaKnown RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 SNAPC2Q13487 334 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 RAB39AQ14964 217 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 LRRC41Q15345 812 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 TTF1Q15361 905 aaPredicted RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 ATP2B3Q16720 1220 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 GEN1Q17RS7 908 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 KHDC1Q4VXA5 237 aaKnown RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 KIF6Q6ZMV9 814 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 FAM43AQ8N2R8 423 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 SLC44A3Q8N4M1 653 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 SUPT20HQ8NEM7 779 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 TMIEQ8NEW7 156 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 KLHDC4Q8TBB5 520 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 CAVIN3Q969G5 261 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 ZG16BQ96DA0 208 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 C8orf48Q96LL4 319 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 Q96MF0 132 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 KLHL32Q96NJ5 620 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 NEUROD6Q96NK8 337 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 TEX13AQ9BXU3 409 aaPredicted RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 UPF3BQ9BZI7 483 aaKnown RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 BOLA2Q9H3K6 86 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 PRDM13Q9H4Q3 707 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 GALNT9Q9HCQ5 603 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 CWC25Q9NXE8 425 aaPredicted RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 JKAMPQ9P055 326 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 CALCOCO1Q9P1Z2 691 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 MTO1Q9Y2Z2 717 aaKnown RBP3.32□□□□□ -1.88
CALD1-221ENST00000489019 SPEF1Q9Y4P9 236 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 UTYO14607 1347 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 MAST3O60307 1309 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 MRC1P22897 1456 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 ADAMTS7Q9UKP4 1686 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 PKD1L3Q7Z443 1732 aa3.32□□□□□ -1.88
CALD1-221ENST00000489019 AK9Q5TCS8 1911 aa3.31□□□□□ -1.88
CALD1-221ENST00000489019 AFDNP55196 1824 aaKnown RBP3.31□□□□□ -1.88
CALD1-221ENST00000489019 XIRP1Q702N8 1843 aaKnown RBP3.31□□□□□ -1.88
CALD1-221ENST00000489019 CRYBG1Q9Y4K1 1723 aa3.31□□□□□ -1.88
CALD1-221ENST00000489019 COL5A2P05997 1499 aaPredicted RBP3.31□□□□□ -1.88
CALD1-221ENST00000489019 RAD50Q92878 1312 aa3.31□□□□□ -1.88
CALD1-221ENST00000489019 USP42Q9H9J4 1324 aaKnown RBP3.31□□□□□ -1.88
CALD1-221ENST00000489019 E9PLN8 166 aa3.31□□□□□ -1.88
CALD1-221ENST00000489019 F2RL2O00254 374 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms