RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 WNT6Q9Y6F9 365 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 PTPRDP23468 1912 aa27.74■■■□□ 2.03
RNF220-216ENST00000488865 PVALEFA0A1B0GWK0 134 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 STAU1O95793 577 aaKnown RBP27.73■■■□□ 2.03
RNF220-216ENST00000488865 PPP3CCP48454 512 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 NOP14P78316 857 aaKnown RBP27.73■■■□□ 2.03
RNF220-216ENST00000488865 NR1H3Q13133 447 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 CD101Q93033 1021 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 LOXL4Q96JB6 756 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 C8orf48Q96LL4 319 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 TRPM5Q9NZQ8 1165 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 RALGAPA1Q6GYQ0 2036 aa27.73■■■□□ 2.03
RNF220-216ENST00000488865 RPP40O75818 363 aaKnown RBP27.72■■■□□ 2.03
RNF220-216ENST00000488865 AKAP3O75969 853 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 USP46P62068 366 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 TNNC1P63316 161 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 WDR72Q3MJ13 1102 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 MDH1BQ5I0G3 518 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 CACNA2D4Q7Z3S7 1137 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 TTC16Q8NEE8 873 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 OR6B3Q8NGW1 331 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 FAM13BQ9NYF5 915 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 NME7Q9Y5B8 376 aa27.72■■■□□ 2.03
RNF220-216ENST00000488865 ATG2BQ96BY7 2078 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 DCDC2BA2VCK2 349 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 SLC30A4O14863 429 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 ZSCAN22P10073 491 aaPredicted RBP27.71■■■□□ 2.03
RNF220-216ENST00000488865 ATICP31939 592 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 PXNP49023 591 aaPredicted RBP27.71■■■□□ 2.03
RNF220-216ENST00000488865 NAIF1Q69YI7 327 aaPredicted RBP27.71■■■□□ 2.03
RNF220-216ENST00000488865 ATL3Q6DD88 541 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 KIAA1958Q8N8K9 716 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 ZNF516Q92618 1163 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 BLZF1Q9H2G9 400 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 PCDHA7Q9UN72 937 aa27.71■■■□□ 2.03
RNF220-216ENST00000488865 HELZP42694 1942 aaKnown RBP27.71■■■□□ 2.03
RNF220-216ENST00000488865 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.7■■■□□ 2.02
RNF220-216ENST00000488865 F8VP50 259 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 PTPN1P18031 435 aaKnown RBP27.7■■■□□ 2.02
RNF220-216ENST00000488865 CASP1P29466 404 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 ME1P48163 572 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 TRPC3Q13507 836 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 KNOP1Q1ED39 458 aaKnown RBP27.7■■■□□ 2.02
RNF220-216ENST00000488865 FOXD4L5Q5VV16 416 aaPredicted RBP27.7■■■□□ 2.02
RNF220-216ENST00000488865 RESP18Q5W5W9 173 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 SYT13Q7L8C5 426 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 CCDC26Q8TAB7 109 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 FOXD4L4Q8WXT5 416 aaPredicted RBP27.7■■■□□ 2.02
RNF220-216ENST00000488865 SYAP1Q96A49 352 aaPredicted RBP27.7■■■□□ 2.02
RNF220-216ENST00000488865 ELOVL4Q9GZR5 314 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 GZF1Q9H116 711 aaPredicted RBP27.7■■■□□ 2.02
RNF220-216ENST00000488865 SLC39A2Q9NP94 309 aa27.7■■■□□ 2.02
RNF220-216ENST00000488865 ZNF840PA6NDX5 716 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 NFATC1O95644 943 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 F13A1P00488 732 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 RAP1GAPP47736 663 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 SLC7A9P82251 487 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 RPLP0P6Q8NHW5 317 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 EZH1Q92800 747 aaPredicted RBP27.69■■■□□ 2.02
RNF220-216ENST00000488865 XYLT2Q9H1B5 865 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 LINC00597Q9H2U6 94 aa27.69■■■□□ 2.02
RNF220-216ENST00000488865 CCDC192P0DO97 292 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 MYL6P60660 151 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 ZXDBP98169 803 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 CUL4BQ13620 913 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 FOXD4L6Q3SYB3 417 aaPredicted RBP27.68■■■□□ 2.02
RNF220-216ENST00000488865 FOXD4L3Q6VB84 417 aaPredicted RBP27.68■■■□□ 2.02
RNF220-216ENST00000488865 GOLGA5Q8TBA6 731 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 ACDQ96AP0 544 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 VRTNQ9H8Y1 702 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 SPAG17Q6Q759 2223 aa27.68■■■□□ 2.02
RNF220-216ENST00000488865 LEFTY2O00292 366 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 AXIN1O15169 862 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 EXOC3O60645 756 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 OLFM2O95897 454 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 AFMP43652 599 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 AP3M2P53677 418 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 TDRD10Q5VZ19 366 aaKnown RBP27.67■■■□□ 2.02
RNF220-216ENST00000488865 KBTBD6Q86V97 674 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 B3GALNT2Q8NCR0 500 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 ZC3H10Q96K80 434 aaKnown RBP27.67■■■□□ 2.02
RNF220-216ENST00000488865 HHIPQ96QV1 700 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 DPEP3Q9H4B8 488 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 NXF1Q9UBU9 619 aaKnown RBP27.67■■■□□ 2.02
RNF220-216ENST00000488865 CFAP45Q9UL16 551 aa27.67■■■□□ 2.02
RNF220-216ENST00000488865 A8MXQ7 604 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 PHACTR2O75167 634 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 EPN2O95208 641 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 TAF10Q12962 218 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 HSCBQ8IWL3 235 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 CEP57L1Q8IYX8 460 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 SLITRK1Q96PX8 696 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 ZNF518BQ9C0D4 1074 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 RNF38Q9H0F5 515 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 ARRDC1-AS1Q9H2J1 176 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 POLR3BQ9NW08 1133 aaPredicted RBP27.66■■■□□ 2.02
RNF220-216ENST00000488865 EBF1Q9UH73 591 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 SPTBN2O15020 2390 aa27.66■■■□□ 2.02
RNF220-216ENST00000488865 APBB3O95704 486 aa27.65■■■□□ 2.02
RNF220-216ENST00000488865 OAS1P00973 400 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms