RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 TDP1Q9NUW8 608 aa13.17□□□□□ -0.3
SFXN5-219ENST00000488839 COMMD8Q9NX08 183 aa13.17□□□□□ -0.3
SFXN5-219ENST00000488839 FBXO4Q9UKT5 387 aa13.17□□□□□ -0.3
SFXN5-219ENST00000488839 CACNA1HO95180 2353 aa13.17□□□□□ -0.3
SFXN5-219ENST00000488839 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
SFXN5-219ENST00000488839 VNN1O95497 513 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 DCNP07585 359 aaKnown RBP13.16□□□□□ -0.3
SFXN5-219ENST00000488839 TCF3P15923 654 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 BDNFP23560 247 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 PSMC1P62191 440 aaKnown RBP13.16□□□□□ -0.3
SFXN5-219ENST00000488839 CYP4F8P98187 520 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 FKBP3Q00688 224 aaKnown RBP13.16□□□□□ -0.3
SFXN5-219ENST00000488839 AMPD2Q01433 879 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 PNOCQ13519 176 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 STIM1Q13586 685 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 UBXN2BQ14CS0 331 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 ZNF528Q3MIS6 628 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 MDH1BQ5I0G3 518 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 ALYREFQ86V81 257 aaKnown RBP13.16□□□□□ -0.3
SFXN5-219ENST00000488839 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
SFXN5-219ENST00000488839 SCN4BQ8IWT1 228 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 CRYBG2Q8N1P7 616 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 MAB21L3Q8N8X9 362 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 FAM3CQ92520 227 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 ZDHHC16Q969W1 377 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 RSPRY1Q96DX4 576 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 FOXQ1Q9C009 403 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 CYP3A43Q9HB55 503 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 TMEM8AQ9HCN3 771 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 MAGED2Q9UNF1 606 aaPredicted RBP13.16□□□□□ -0.3
SFXN5-219ENST00000488839 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 PIAS3Q9Y6X2 628 aa13.16□□□□□ -0.3
SFXN5-219ENST00000488839 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 SHISA7A6NL88 538 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 SLC16A3O15427 465 aaKnown RBP13.15□□□□□ -0.3
SFXN5-219ENST00000488839 HCRTO43612 131 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
SFXN5-219ENST00000488839 USP17L7P0C7H9 530 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 EPB41P11171 864 aaKnown RBP13.15□□□□□ -0.3
SFXN5-219ENST00000488839 PRCPP42785 496 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 GPR15P49685 360 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 KRT39Q6A163 491 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 ZC3H14Q6PJT7 736 aaKnown RBP13.15□□□□□ -0.3
SFXN5-219ENST00000488839 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
SFXN5-219ENST00000488839 ADSSL1Q8N142 457 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 SYNPOQ8N3V7 929 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 OVCA2Q8WZ82 227 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 EXOC4Q96A65 974 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 DHTKD1Q96HY7 919 aaPredicted RBP13.15□□□□□ -0.3
SFXN5-219ENST00000488839 TRPM5Q9NZQ8 1165 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 NME7Q9Y5B8 376 aa13.15□□□□□ -0.3
SFXN5-219ENST00000488839 NCANO14594 1321 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 RTN3O95197 1032 aaPredicted RBP13.14□□□□□ -0.31
SFXN5-219ENST00000488839 HLA-DRAP01903 254 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 TARSP26639 723 aaKnown RBP13.14□□□□□ -0.31
SFXN5-219ENST00000488839 PIK3CAP42336 1068 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 KPNA1P52294 538 aaPredicted RBP13.14□□□□□ -0.31
SFXN5-219ENST00000488839 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 FZD5Q13467 585 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 PDGFRLQ15198 375 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 DGKKQ5KSL6 1271 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 SDHAF4Q5VUM1 108 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 TXNDC8Q6A555 127 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 CC2D1AQ6P1N0 951 aaPredicted RBP13.14□□□□□ -0.31
SFXN5-219ENST00000488839 NUP93Q8N1F7 819 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 PDZD8Q8NEN9 1154 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 USP13Q92995 863 aaPredicted RBP13.14□□□□□ -0.31
SFXN5-219ENST00000488839 SMARCD1Q96GM5 515 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 LRRC3BQ96PB8 259 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 SLITRK1Q96PX8 696 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 FAM126AQ9BYI3 521 aaPredicted RBP13.14□□□□□ -0.31
SFXN5-219ENST00000488839 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
SFXN5-219ENST00000488839 MTF2Q9Y483 593 aaPredicted RBP13.14□□□□□ -0.31
SFXN5-219ENST00000488839 DENND4CQ5VZ89 1909 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 F8VP50 259 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 PSMA7O14818 248 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 LAMTOR5O43504 91 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 TADA3O75528 432 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 CLSTN1O94985 981 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 HDCP19113 662 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 ASPAP45381 313 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 GCLMP48507 274 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 CDH8P55286 799 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 PPP3CAQ08209 521 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 LRRC32Q14392 662 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 ITPRIPL2Q3MIP1 535 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 FBXL13Q8NEE6 735 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 CHRDQ9H2X0 955 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 DPEP3Q9H4B8 488 aa13.13□□□□□ -0.31
SFXN5-219ENST00000488839 SMYD3Q9H7B4 428 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms