RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 THADAQ6YHU6 1953 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 K7EQS6 105 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 DCLK1O15075 740 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 YEATS4O95619 227 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 CSRP1P21291 193 aaKnown RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 ACAT1P24752 427 aaKnown RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 EIF2DP41214 584 aaKnown RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 SOWAHAQ2M3V2 549 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 SCARA3Q6AZY7 606 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 C4orf50Q6ZRC1 276 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 SPATA2LQ8IUW3 424 aaPredicted RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 TSTD1Q8NFU3 115 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 RASSF8Q8NHQ8 419 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 KBTBD7Q8WVZ9 684 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 CYP2S1Q96SQ9 504 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 TRPC7Q9HCX4 862 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 EVLQ9UI08 416 aaPredicted RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 MMP17Q9ULZ9 603 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 MORC2Q9Y6X9 1032 aaPredicted RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 BAHCC1Q9P281 2608 aa13.13□□□□□ -0.31
TTC3-221ENST00000488522 ASCC3Q8N3C0 2202 aaKnown RBP13.13□□□□□ -0.31
TTC3-221ENST00000488522 C2orf78A6NCI8 922 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 MYMKA6NI61 221 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 CDX4O14627 284 aaPredicted RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 KIAA0391O15091 583 aaKnown RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 NOVA1P51513 510 aaKnown RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 DGKEP52429 567 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 SLC7A9P82251 487 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 MRPS21P82921 87 aaKnown RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 RBP5P82980 135 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 ZXDBP98169 803 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 CREB5Q02930 508 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 KCNB1Q14721 858 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 SLC39A14Q15043 492 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 MAPRE1Q15691 268 aaKnown RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 HSF5Q4G112 596 aaPredicted RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 USP39Q53GS9 565 aaKnown RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 DAB2IPQ5VWQ8 1189 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 DYMQ7RTS9 669 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 KDF1Q8NAX2 398 aaPredicted RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 EPSTI1Q96J88 318 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 LINC00597Q9H2U6 94 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
TTC3-221ENST00000488522 CDH9Q9ULB4 789 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 SNX9Q9Y5X1 595 aa13.12□□□□□ -0.31
TTC3-221ENST00000488522 A0A0A0MRY4 1105 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 C4orf47A7E2U8 309 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 SPTLC2O15270 562 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 HCRTO43612 131 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 CYP17A1P05093 508 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 CEACAM1P13688 526 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 HDCP19113 662 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 PPP3CCP48454 512 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 CASP5P51878 434 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 NOP14P78316 857 aaKnown RBP13.11□□□□□ -0.31
TTC3-221ENST00000488522 CRY1Q16526 586 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
TTC3-221ENST00000488522 UNQ6494/PRO21346Q6UXR6 183 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 CSGALNACT2Q8N6G5 542 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 MDGA1Q8NFP4 955 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
TTC3-221ENST00000488522 SYT15Q9BQS2 421 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 CBWD1Q9BRT8 395 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 SCAND2PQ9GZW5 306 aaPredicted RBP13.11□□□□□ -0.31
TTC3-221ENST00000488522 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 CRTAC1Q9NQ79 661 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 CCDC39Q9UFE4 941 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 FBXO2Q9UK22 296 aaPredicted RBP13.11□□□□□ -0.31
TTC3-221ENST00000488522 SRPRBQ9Y5M8 271 aaKnown RBP13.11□□□□□ -0.31
TTC3-221ENST00000488522 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
TTC3-221ENST00000488522 TMEM8BA6NDV4 472 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 LEFTY2O00292 366 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 KHNYNO15037 678 aaKnown RBP13.1□□□□□ -0.31
TTC3-221ENST00000488522 PPP6R2O75170 966 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 GCNT3O95395 438 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 OAS1P00973 400 aaKnown RBP13.1□□□□□ -0.31
TTC3-221ENST00000488522 FAM163BP0C2L3 166 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 TMEM191BP0C7N4 346 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 BCKDHBP21953 392 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 WARSP23381 471 aaKnown RBP13.1□□□□□ -0.31
TTC3-221ENST00000488522 P2RY2P41231 377 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 ZNF252P-AS1Q0IIN9 211 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 SPDYCQ5MJ68 293 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 DENND5BQ6ZUT9 1274 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 SV2BQ7L1I2 683 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 CYP2U1Q7Z449 544 aa13.1□□□□□ -0.31
TTC3-221ENST00000488522 SCN4BQ8IWT1 228 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms