RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 TMC6Q7Z403 805 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-218ENST00000487565 VSTM4Q8IW00 320 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 DRC7Q8IY82 874 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 CMTR2Q8IYT2 770 aaKnown RBP8.21□□□□□ -1.1
GARNL3-218ENST00000487565 LRRC52Q8N7C0 313 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 IQCDQ96DY2 449 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 RNPC3Q96LT9 517 aaKnown RBP8.21□□□□□ -1.1
GARNL3-218ENST00000487565 MYRFLQ96LU7 910 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 NT5C1BQ96P26 610 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 FAM193BQ96PV7 902 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-218ENST00000487565 CXCL16Q9H2A7 254 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 GOLGA2P5Q9HBQ8 144 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 NPHS2Q9NP85 383 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 ZFP64Q9NPA5 681 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 TBC1D13Q9NVG8 400 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 RAB20Q9NX57 234 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 SIX4Q9UIU6 781 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 SIK3Q9Y2K2 1263 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 COQ4Q9Y3A0 265 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 DAAM1Q9Y4D1 1078 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 ITIH6Q6UXX5 1313 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 COL4A6Q14031 1691 aa8.21□□□□□ -1.1
GARNL3-218ENST00000487565 TET1Q8NFU7 2136 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 H0YGN5 161 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 EIF1AYO14602 144 aaKnown RBP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 ZC3H11AO75152 810 aaKnown RBP eCLIP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 DGKIO75912 1065 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 ASS1P00966 412 aaKnown RBP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 P4HA1P13674 534 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 ATP2A2P16615 1042 aaKnown RBP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PON1P27169 355 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 LRPAP1P30533 357 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 ATICP31939 592 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 RPL9P32969 192 aaKnown RBP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PBX1P40424 430 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 GRIA4P48058 902 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PREPP48147 710 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 TAF6P49848 677 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 KLK7P49862 253 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 MYL6P60660 151 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 TNNC1P63316 161 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 DSC1Q08554 894 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 LRMPQ12912 555 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 BTG3Q14201 252 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 ZBTB6Q15916 424 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PTPN21Q16825 1174 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 KIAA0319Q5VV43 1072 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 C9orf57Q5W0N0 161 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 SCARA5Q6ZMJ2 495 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 TMCO2Q7Z6W1 182 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PPFIBP1Q86W92 1011 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 HERC6Q8IVU3 1022 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 GSTCDQ8NEC7 633 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 TAF4BQ92750 862 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 SEMA4DQ92854 862 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 TOP1MTQ969P6 601 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 HPDLQ96IR7 371 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 DMRTB1Q96MA1 342 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 CASD1Q96PB1 797 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PI4K2AQ9BTU6 479 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 GANQ9H2C0 597 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 CLEC4MQ9H2X3 399 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 PLCB1Q9NQ66 1216 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 APEX2Q9UBZ4 518 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 AGAP1Q9UPQ3 857 aa8.2□□□□□ -1.1
GARNL3-218ENST00000487565 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.2□□□□□ -1.1
GARNL3-218ENST00000487565 ANK1P16157 1881 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 CITO14578 2027 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 ANO9A1A5B4 782 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 MEGF11A6BM72 1044 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 PPEF2O14830 753 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 GSC2O15499 205 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 B4GALT3O60512 393 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 GJB5O95377 273 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 LAG3P18627 525 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 SLC9A1P19634 815 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 TBXAS1P24557 533 aaPredicted RBP8.19□□□□□ -1.1
GARNL3-218ENST00000487565 OR1G1P47890 313 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 POLR2FP61218 127 aaKnown RBP8.19□□□□□ -1.1
GARNL3-218ENST00000487565 RAPGEF1Q13905 1077 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 LRP8Q14114 963 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 NAB2Q15742 525 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 SGSM1Q2NKQ1 1148 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 ZNF667Q5HYK9 610 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 C9orf50Q5SZB4 431 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 SPOUT1Q5T280 376 aaKnown RBP8.19□□□□□ -1.1
GARNL3-218ENST00000487565 SPOPLQ6IQ16 392 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 CACNA2D4Q7Z3S7 1137 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 ARHGEF19Q8IW93 802 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 PPM1KQ8N3J5 372 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 PHOSPHO2Q8TCD6 241 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 FAM81BQ96LP2 452 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 TMEM175Q9BSA9 504 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 NUP58Q9BVL2 599 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 XYLT2Q9H1B5 865 aa8.19□□□□□ -1.1
GARNL3-218ENST00000487565 RC3H2Q9HBD1 1191 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms