RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 KNOP1Q1ED39 458 aaKnown RBP13.02□□□□□ -0.33
VPS16-208ENST00000487461 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 EML3Q32P44 896 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 DENND5BQ6ZUT9 1274 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 HS2ST1Q7LGA3 356 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.02□□□□□ -0.33
VPS16-208ENST00000487461 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 CPA6Q8N4T0 437 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 PLEKHO2Q8TD55 490 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 CEP295NLQ96MC4 621 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 RNF38Q9H0F5 515 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 DPEP3Q9H4B8 488 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 SEMA4GQ9NTN9 838 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 FAM13BQ9NYF5 915 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 TRPM5Q9NZQ8 1165 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 CDV3Q9UKY7 258 aaKnown RBP13.02□□□□□ -0.33
VPS16-208ENST00000487461 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 SLC8A2Q9UPR5 921 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 UBE4BO95155 1302 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 SPTBN2O15020 2390 aa13.02□□□□□ -0.33
VPS16-208ENST00000487461 F8VP50 259 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 TRIM66O15016 1216 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 AXIN1O15169 862 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 TCF3P15923 654 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 ANXA13P27216 316 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 CASP4P49662 377 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 CACNA2D1P54289 1103 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 TNNC1P63316 161 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
VPS16-208ENST00000487461 TRPC3Q13507 836 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 PKP1Q13835 747 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 KCNB1Q14721 858 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 CSRP2Q16527 193 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 GAB3Q8WWW8 586 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 CD101Q93033 1021 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 ATP2A3Q93084 1043 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 C8orf48Q96LL4 319 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 RTKNQ9BST9 563 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 TTLL2Q9BWV7 592 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 B3GNT5Q9BYG0 378 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 TMEM30AQ9NV96 361 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
VPS16-208ENST00000487461 NXF1Q9UBU9 619 aaKnown RBP13.01□□□□□ -0.33
VPS16-208ENST00000487461 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 RCOR1Q9UKL0 485 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 OBSL1O75147 1896 aa13.01□□□□□ -0.33
VPS16-208ENST00000487461 CCDC163A0A0D9SF12 145 aa13□□□□□ -0.33
VPS16-208ENST00000487461 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13□□□□□ -0.33
VPS16-208ENST00000487461 A8MXQ7 604 aa13□□□□□ -0.33
VPS16-208ENST00000487461 LEFTY2O00292 366 aa13□□□□□ -0.33
VPS16-208ENST00000487461 CLDN5O00501 218 aa13□□□□□ -0.33
VPS16-208ENST00000487461 KLRC4O43908 158 aa13□□□□□ -0.33
VPS16-208ENST00000487461 GDF9O60383 454 aa13□□□□□ -0.33
VPS16-208ENST00000487461 EXOC3O60645 756 aa13□□□□□ -0.33
VPS16-208ENST00000487461 STAU1O95793 577 aaKnown RBP13□□□□□ -0.33
VPS16-208ENST00000487461 PDIA4P13667 645 aaKnown RBP13□□□□□ -0.33
VPS16-208ENST00000487461 PFKLP17858 780 aa13□□□□□ -0.33
VPS16-208ENST00000487461 ATICP31939 592 aa13□□□□□ -0.33
VPS16-208ENST00000487461 NOP14P78316 857 aaKnown RBP13□□□□□ -0.33
VPS16-208ENST00000487461 TAF10Q12962 218 aa13□□□□□ -0.33
VPS16-208ENST00000487461 STK4Q13043 487 aa13□□□□□ -0.33
VPS16-208ENST00000487461 NR1H3Q13133 447 aa13□□□□□ -0.33
VPS16-208ENST00000487461 FBXO43Q4G163 708 aa13□□□□□ -0.33
VPS16-208ENST00000487461 ATL3Q6DD88 541 aa13□□□□□ -0.33
VPS16-208ENST00000487461 PRR23CQ6ZRP0 262 aa13□□□□□ -0.33
VPS16-208ENST00000487461 CACNA2D4Q7Z3S7 1137 aa13□□□□□ -0.33
VPS16-208ENST00000487461 KBTBD6Q86V97 674 aa13□□□□□ -0.33
VPS16-208ENST00000487461 CAMKK1Q8N5S9 505 aa13□□□□□ -0.33
VPS16-208ENST00000487461 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
VPS16-208ENST00000487461 RPLP0P6Q8NHW5 317 aa13□□□□□ -0.33
VPS16-208ENST00000487461 ELMO3Q96BJ8 720 aa13□□□□□ -0.33
VPS16-208ENST00000487461 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
VPS16-208ENST00000487461 DMAC2Q9NW81 257 aa13□□□□□ -0.33
VPS16-208ENST00000487461 ANAPC1Q9H1A4 1944 aa13□□□□□ -0.33
VPS16-208ENST00000487461 ANTXRLA6NF34 631 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 SLC30A4O14863 429 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 PHACTR2O75167 634 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 RPP40O75818 363 aaKnown RBP12.99□□□□□ -0.33
VPS16-208ENST00000487461 ABL1P00519 1130 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 C4BPAP04003 597 aaKnown RBP12.99□□□□□ -0.33
VPS16-208ENST00000487461 HSP90AA1P07900 732 aaKnown RBP12.99□□□□□ -0.33
VPS16-208ENST00000487461 SLFN14P0C7P3 912 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 RAP1GAPP47736 663 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 PPP3CCP48454 512 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 PDE6CP51160 858 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 CDH8P55286 799 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 SLC7A9P82251 487 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 GAB4Q2WGN9 574 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 TDRD10Q5VZ19 366 aaKnown RBP12.99□□□□□ -0.33
VPS16-208ENST00000487461 HSCBQ8IWL3 235 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 CEP57L1Q8IYX8 460 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 ADGRG2Q8IZP9 1017 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 B3GALNT2Q8NCR0 500 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 KIAA0895Q8NCT3 520 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 NETO1Q8TDF5 533 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms