RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CLEC20AQ6ZU45 233 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 GAREM2Q75VX8 874 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 ZMIZ2Q8NF64 920 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 FAM81BQ96LP2 452 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 FHOD1Q9Y613 1164 aa12.55□□□□□ -0.4
HPS4-214ENST00000485842 ZNF638Q14966 1978 aaKnown RBP12.54□□□□□ -0.4
HPS4-214ENST00000485842 C5orf42Q9H799 3197 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 MOSPD3O75425 235 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 BEST1O76090 585 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 ASGR2P07307 311 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 PAEPP09466 180 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 PNMA6AP0CW24 399 aaPredicted RBP12.54□□□□□ -0.4
HPS4-214ENST00000485842 VDRP11473 427 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 NPR3P17342 541 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 ZNF132P52740 706 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 USP46P62068 366 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 SYCP1Q15431 976 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 ARHGAP15Q53QZ3 475 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 STXBP5Q5T5C0 1151 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 KLHDC7AQ5VTJ3 777 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
HPS4-214ENST00000485842 ZDHHC14Q8IZN3 488 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 TFAP2BQ92481 460 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 TRMT2BQ96GJ1 504 aaKnown RBP12.54□□□□□ -0.4
HPS4-214ENST00000485842 IL21Q9HBE4 155 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 FAM207AQ9NSI2 230 aaPredicted RBP12.54□□□□□ -0.4
HPS4-214ENST00000485842 EPS15L1Q9UBC2 864 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 UXTQ9UBK9 157 aaPredicted RBP12.54□□□□□ -0.4
HPS4-214ENST00000485842 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 TSPAN16Q9UKR8 245 aa12.54□□□□□ -0.4
HPS4-214ENST00000485842 DENND4CQ5VZ89 1909 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 O00370 1275 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 TADA3O75528 432 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 RTN3O95197 1032 aaPredicted RBP12.53□□□□□ -0.4
HPS4-214ENST00000485842 SERPINC1P01008 464 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 F11P03951 625 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 UCHL3P15374 230 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 SLC5A3P53794 718 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 BCAT1P54687 386 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 PTPN21Q16825 1174 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 FILIP1LQ4L180 1135 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 GPR158Q5T848 1215 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 DPY19L2P1Q6NXN4 242 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 GPRIN1Q7Z2K8 1008 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 RNF135Q8IUD6 432 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 RNF214Q8ND24 703 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 NEK11Q8NG66 645 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 SHC3Q92529 594 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 MRPS31Q92665 395 aaKnown RBP12.53□□□□□ -0.4
HPS4-214ENST00000485842 FBXO32Q969P5 355 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 CEP295NLQ96MC4 621 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 GANQ9H2C0 597 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 CSNK1G1Q9HCP0 422 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 PLCB1Q9NQ66 1216 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 GDE1Q9NZC3 331 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 KIAA1257Q9ULG3 409 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 CNTN6Q9UQ52 1028 aa12.53□□□□□ -0.4
HPS4-214ENST00000485842 ZFP37Q9Y6Q3 630 aaPredicted RBP12.53□□□□□ -0.4
HPS4-214ENST00000485842 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 M0QYV0 167 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 TEX33O43247 280 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 THAP12O43422 761 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 MICAL2O94851 1124 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 RFX1P22670 979 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 YWHAQP27348 245 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 GNA15P30679 374 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 SLC8A3P57103 927 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 POLR2FP61218 127 aaKnown RBP12.52□□□□□ -0.41
HPS4-214ENST00000485842 BST2Q10589 180 aaKnown RBP12.52□□□□□ -0.41
HPS4-214ENST00000485842 TAF10Q12962 218 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 DRAP1Q14919 205 aaPredicted RBP12.52□□□□□ -0.41
HPS4-214ENST00000485842 POTEHQ6S545 545 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 TMEM150AQ86TG1 271 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 GPIHBP1Q8IV16 184 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 ANKRD52Q8NB46 1076 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 SCAMP5Q8TAC9 235 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 UBA3Q8TBC4 463 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 ZSCAN18Q8TBC5 510 aaPredicted RBP12.52□□□□□ -0.41
HPS4-214ENST00000485842 RSAD2Q8WXG1 361 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 MYRFLQ96LU7 910 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 SLITRK1Q96PX8 696 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 KXD1Q9BQD3 176 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 TTLL2Q9BWV7 592 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 ACP6Q9NPH0 428 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 NLRC4Q9NPP4 1024 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
HPS4-214ENST00000485842 EHD2Q9NZN4 543 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.41
HPS4-214ENST00000485842 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms