RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.79□□□□□ -1.482e-6■■□□□ 12.8
SMARCC1-207ENST00000485833 CFAP65Q6ZU64 1925 aaKnown RBP5.79□□□□□ -1.48
SMARCC1-207ENST00000485833 KAT6AQ92794 2004 aa5.79□□□□□ -1.48
SMARCC1-207ENST00000485833 KDM5DQ9BY66 1539 aa5.79□□□□□ -1.48
SMARCC1-207ENST00000485833 NCOA2Q15596 1464 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 PPM1DO15297 605 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 ZNF37AP17032 561 aaPredicted RBP5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 PCSK6P29122 969 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 PPIFP30405 207 aaKnown RBP5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 VIPR2P41587 438 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 PXNP49023 591 aaPredicted RBP5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 EIF2B5Q13144 721 aaKnown RBP5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 BMPR2Q13873 1038 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 FAM153CQ494X1 144 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 PLAC9Q5JTB6 97 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 COLEC12Q5KU26 742 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 ZBTB34Q8NCN2 500 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 MIA2Q96PC5 1412 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 DKK3Q9UBP4 350 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 FAM135AQ9P2D6 1515 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 GPATCH8Q9UKJ3 1502 aaKnown RBP5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 TMEM94Q12767 1356 aa5.78□□□□□ -1.48
SMARCC1-207ENST00000485833 CLIP1P30622 1438 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 RBMXL2O75526 392 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 THP07101 528 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 PDHA1P08559 390 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 EBLN1P0CF75 366 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 U2AF1L5P0DN76 240 aaPredicted RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 NPR1P16066 1061 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 PROK1P58294 105 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 LILRA4P59901 499 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 U2AF1Q01081 240 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 ZNF618Q5T7W0 954 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 CXorf57Q6NSI4 855 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 ZNF551Q7Z340 670 aaPredicted RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 AMIGO2Q86SJ2 522 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 DTX2Q86UW9 622 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 RASAL3Q86YV0 1011 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 RAVER1Q8IY67 606 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 PUS7Q96PZ0 661 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 P2RX7Q99572 595 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 PTDSS2Q9BVG9 487 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 SERTAD4Q9NUC0 356 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 XPR1Q9UBH6 696 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 WNT6Q9Y6F9 365 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 SCAF11Q99590 1463 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 NLRP1Q9C000 1473 aa5.77□□□□□ -1.49
SMARCC1-207ENST00000485833 ZNF644Q9H582 1327 aaPredicted RBP5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 TIAM1Q13009 1591 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 SHPRHQ149N8 1683 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 TLR5O60602 858 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 S100BP04271 92 aaPredicted RBP5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 DRD4P21917 467 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 SLC11A2P49281 568 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 CCT8P50990 548 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 AGFG1P52594 562 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 ANO6Q4KMQ2 910 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 ARHGAP40Q5TG30 622 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 ZNF788Q6ZQV5 615 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 KBTBD7Q8WVZ9 684 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 RUNDC1Q96C34 613 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 TRIM54Q9BYV2 358 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 ZMAT3Q9HA38 289 aaKnown RBP5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 ARHGEF3Q9NR81 526 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 SERTAD3Q9UJW9 196 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 ADAM21Q9UKJ8 722 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 SHOC2Q9UQ13 582 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 TMX2Q9Y320 296 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 JCADQ9P266 1359 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 DIP2AQ14689 1571 aa5.76□□□□□ -1.49
SMARCC1-207ENST00000485833 CEP152O94986 1710 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 A0A1W2PPL8 197 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 SLC16A3O15427 465 aaKnown RBP5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 TUSC2O75896 110 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 SCGB1D2O95969 90 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 ARFIP2P53365 341 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 UCP3P55916 312 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 GPSM2P81274 684 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 SATB1Q01826 763 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 NFE2Q16621 373 aaPredicted RBP5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 OVCH2Q7RTZ1 564 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 MAVSQ7Z434 540 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 B3GNT5Q9BYG0 378 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 SSX2IPQ9Y2D8 614 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 FRMD4BQ9Y2L6 1034 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 ERVK-7P63135 1459 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 CDK12Q9NYV4 1490 aaPredicted RBP5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 ARHGAP23Q9P227 1491 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 MAST1Q9Y2H9 1570 aa5.75□□□□□ -1.49
SMARCC1-207ENST00000485833 FMN1Q68DA7 1419 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 MROH1Q8NDA8 1641 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 MYO1CO00159 1063 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 PHGDHO43175 533 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 CTNND1O60716 968 aaKnown RBP5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 MYBP10242 640 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 CYP2C9P11712 490 aa5.74□□□□□ -1.49
SMARCC1-207ENST00000485833 JUPP14923 745 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms