RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 HSFY1Q96LI6 401 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 CDCA3Q99618 268 aaPredicted RBP16.74■□□□□ 0.27
APOE-205ENST00000485628 KRT82Q9NSB4 513 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 ABI2Q9NYB9 513 aaPredicted RBP16.74■□□□□ 0.27
APOE-205ENST00000485628 HESX1Q9UBX0 185 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 USP3Q9Y6I4 520 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 NCANO14594 1321 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 ATP8B3O60423 1300 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 ZNF638Q14966 1978 aaKnown RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 FAM92AA1XBS5 289 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 EIF3CLB5ME19 914 aaKnown RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 F8VP50 259 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 M0QYV0 167 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 GLUD1P00367 558 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 ATF6P18850 670 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 MMP8P22894 467 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 CDR1P51861 262 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 KIF11P52732 1056 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 GSCP56915 257 aaPredicted RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 MAP3K7CLP57077 242 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 MTF1Q14872 753 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 MON1BQ7L1V2 547 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 PIGZQ86VD9 579 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 VN1R2Q8NFZ6 395 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 CCDC42Q96M95 316 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 CPXM1Q96SM3 734 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 EIF3CQ99613 913 aaKnown RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 PLEKHA4Q9H4M7 779 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 NSUN3Q9H649 340 aaKnown RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 DMAP1Q9NPF5 467 aaPredicted RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 SLC27A5Q9Y2P5 690 aa16.73■□□□□ 0.27
APOE-205ENST00000485628 REXO2Q9Y3B8 237 aaKnown RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 EPN1Q9Y6I3 576 aaPredicted RBP16.73■□□□□ 0.27
APOE-205ENST00000485628 TCRBV5S1A1TA0A578 114 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 TRIM66O15016 1216 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 PER2O15055 1255 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 ARHGAP6O43182 974 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 RTN2O75298 545 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 NDUFA10O95299 355 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 POU2F2P09086 479 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 HOXA9P31269 272 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 GPR15P49685 360 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 GFPT1Q06210 699 aaPredicted RBP16.72■□□□□ 0.27
APOE-205ENST00000485628 HYAL1Q12794 435 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 PDCLQ13371 301 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 PTPN20Q4JDL3 420 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 ZNF697Q5TEC3 545 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 NAA35Q5VZE5 725 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 PM20D1Q6GTS8 502 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 ALKBH5Q6P6C2 394 aaKnown RBP16.72■□□□□ 0.27
APOE-205ENST00000485628 GPRIN1Q7Z2K8 1008 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 PASD1Q8IV76 773 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 KREMEN2Q8NCW0 462 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
APOE-205ENST00000485628 CPA5Q8WXQ8 436 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 VCPIP1Q96JH7 1222 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 MED10Q9BTT4 135 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 INSL5Q9Y5Q6 135 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 HCFC2Q9Y5Z7 792 aa16.72■□□□□ 0.27
APOE-205ENST00000485628 NOTCH4Q99466 2003 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 EPCAMP16422 314 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.274e-6■■■■□ 25.2
APOE-205ENST00000485628 RPL10AP62906 217 aaKnown RBP16.71■□□□□ 0.27
APOE-205ENST00000485628 DDR2Q16832 855 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 CTC1Q2NKJ3 1217 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 PPP1R2P3Q6NXS1 205 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 BHLHA9Q7RTU4 235 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 VPS36Q86VN1 386 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 MCOLN2Q8IZK6 566 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 EFHBQ8N7U6 833 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 KHSRPQ92945 711 aaKnown RBP eCLIP16.71■□□□□ 0.27
APOE-205ENST00000485628 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 TTLL2Q9BWV7 592 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 TLE6Q9H808 572 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 CYP4F11Q9HBI6 524 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 COMMD8Q9NX08 183 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 TJP2Q9UDY2 1190 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 YIPF1Q9Y548 306 aa16.71■□□□□ 0.27
APOE-205ENST00000485628 ZMYND10O75800 440 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 SOAT2O75908 522 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 GLP2RO95838 553 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 FTLP02792 175 aaPredicted RBP16.7■□□□□ 0.26
APOE-205ENST00000485628 SPATA31D3P0C874 917 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 HMGA1P17096 107 aaKnown RBP16.7■□□□□ 0.26
APOE-205ENST00000485628 GRIK1P39086 918 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 NRIP1P48552 1158 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 C1QBPQ07021 282 aaKnown RBP16.7■□□□□ 0.26
APOE-205ENST00000485628 TCEAL5Q5H9L2 206 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 SPATA31D4Q6ZUB0 917 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 CCDC149Q6ZUS6 474 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 PPP1R13BQ96KQ4 1090 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 LRRC3Q9BY71 257 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 DOCK6Q96HP0 2047 aa16.7■□□□□ 0.26
APOE-205ENST00000485628 PAPSS1O43252 624 aaPredicted RBP16.69■□□□□ 0.26
APOE-205ENST00000485628 AKR1B10O60218 316 aa16.69■□□□□ 0.26
APOE-205ENST00000485628 ERBB2P04626 1255 aa16.69■□□□□ 0.26
APOE-205ENST00000485628 CYLC1P35663 651 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms