RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 FAM86B2P0C5J1 330 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 PTPN2P17706 415 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 OR1D2P34982 312 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 DNM2P50570 870 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 FAM193AP78312 1265 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 CDC42EP1Q00587 391 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 PRKCEQ02156 737 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 FAM171A1Q5VUB5 890 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 PRAMEF13Q5VWM6 474 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 ZNF746Q6NUN9 644 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-210ENST00000485247 C1orf228Q6PIY5 440 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 CATIPQ7Z7H3 387 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 PLA2G4DQ86XP0 818 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 HID1Q8IV36 788 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 YAF2Q8IY57 180 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 PHC3Q8NDX5 983 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 CTCFLQ8NI51 663 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-210ENST00000485247 DEPDC1BQ8WUY9 529 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 SMARCD2Q92925 531 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 MSANTD3Q96H12 275 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 TTPALQ9BTX7 342 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 MIR1-1HGQ9H1L0 117 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 C8orf33Q9H7E9 229 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-210ENST00000485247 UBN1Q9NPG3 1134 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 SUCLA2Q9P2R7 463 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-210ENST00000485247 TJP2Q9UDY2 1190 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 SLC8A2Q9UPR5 921 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 INVSQ9Y283 1065 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 SNX11Q9Y5W9 270 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 NCANO14594 1321 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 WDR81Q562E7 1941 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 CCDC194A0A1B0GVG4 234 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 ERICH2A1L162 156 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 WDR27A2RRH5 827 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 MYBPHLA2RUH7 354 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 TMEM150BA6NC51 233 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 HEPACAM2A8MVW5 462 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 PLEKHA8P1O95397 391 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 CST3P01034 146 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 GJA1P17302 382 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 HOXA11P31270 313 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 CCR2P41597 374 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 MLLT6P55198 1093 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 RAB33AQ14088 237 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 HSP90AA2PQ14568 343 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 UGCGQ16739 394 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 MTERF2Q49AM1 385 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 CWC27Q6UX04 472 aaKnown RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 HEATR3Q7Z4Q2 680 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 ZNF410Q86VK4 478 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 RALGPS2Q86X27 583 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 MFSD6LQ8IWD5 586 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 SMAP1Q8IYB5 467 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 SYNPOQ8N3V7 929 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 SRBD1Q8N5C6 995 aaKnown RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 LRRN4CLQ8ND94 238 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 CNNM3Q8NE01 707 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 ZSCAN18Q8TBC5 510 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 PIGKQ92643 395 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 RILPL2Q969X0 211 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 DPH2Q9BQC3 489 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 PAAF1Q9BRP4 392 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 ZNF577Q9BSK1 485 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 EIF2AQ9BY44 585 aaKnown RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 ANO3Q9BYT9 981 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 MINDY3Q9H8M7 445 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 IFT122Q9HBG6 1241 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 PRDM7Q9NQW5 492 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 TBC1D22BQ9NU19 505 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 GTSE1Q9NYZ3 720 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 IPPQ9Y573 584 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 MYH9P35579 1960 aaKnown RBP5.92□□□□□ -1.46
PTPN4-210ENST00000485247 FREM2Q5SZK8 3169 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 SF3B1O75533 1304 aaKnown RBP eCLIP5.92□□□□□ -1.469e-6■■■■■ 68.9
PTPN4-210ENST00000485247 LAMA1P25391 3075 aa5.92□□□□□ -1.46
PTPN4-210ENST00000485247 ASCC3Q8N3C0 2202 aaKnown RBP5.91□□□□□ -1.46
PTPN4-210ENST00000485247 CACNA1EQ15878 2313 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 IGKV6-21A0A0C4DH24 114 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 CASTOR2A6NHX0 329 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 PCNX2A6NKB5 2137 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 ZNF197O14709 1029 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 CHADO15335 359 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 ATG13O75143 517 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 FOSP01100 380 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-210ENST00000485247 LRG1P02750 347 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 SRGAP2CP0DJJ0 459 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 JUNBP17275 347 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-210ENST00000485247 SDSP20132 328 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 AKAP5P24588 427 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 SMARCA1P28370 1054 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 TXKP42681 527 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 TRDNQ13061 729 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 KARSQ15046 597 aaKnown RBP5.91□□□□□ -1.46
PTPN4-210ENST00000485247 TARBP2Q15633 366 aaKnown RBP5.91□□□□□ -1.46
PTPN4-210ENST00000485247 TRIM61Q5EBN2 209 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 CYP4A22Q5TCH4 519 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 LETMD1Q6P1Q0 360 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 CCNI2Q6ZMN8 369 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-210ENST00000485247 C22orf34Q6ZV56 151 aa5.91□□□□□ -1.46
PTPN4-210ENST00000485247 PDZD4Q76G19 769 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms