RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 C3orf58Q8NDZ4 430 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 GOLGA5Q8TBA6 731 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 FGF13Q92913 245 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 C18orf25Q96B23 403 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF560Q96MR9 790 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ASB16Q96NS5 453 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 USP28Q96RU2 1077 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 MYADMQ96S97 322 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 FIZ1Q96SL8 496 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 NELL2Q99435 816 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 STRA6Q9BX79 667 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 GOLGA2P5Q9HBQ8 144 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 ASAH2Q9NR71 780 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 PANK4Q9NVE7 773 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 CACNG4Q9UBN1 327 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 MRPS17Q9Y2R5 130 aaKnown RBP6.65□□□□□ -1.34
PTCD3-215ENST00000484203 INSL5Q9Y5Q6 135 aa6.65□□□□□ -1.34
PTCD3-215ENST00000484203 C5orf42Q9H799 3197 aa6.65□□□□□ -1.35
PTCD3-215ENST00000484203 PTPRZ1P23471 2315 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-215ENST00000484203 RIF1Q5UIP0 2472 aaKnown RBP6.64□□□□□ -1.35
PTCD3-215ENST00000484203 A0A0A0MRY4 1105 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 PVALEFA0A1B0GWK0 134 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ANO9A1A5B4 782 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 WDR27A2RRH5 827 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 PDE2AO00408 941 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-215ENST00000484203 NCAM2O15394 837 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ADAM12O43184 909 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 EXTL3O43909 919 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 PRPF40AO75400 957 aaKnown RBP6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ECI2O75521 394 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 RHOP08100 348 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 AOC1P19801 751 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ME1P48163 572 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ACOT2P49753 483 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 TAF6P49848 677 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ARPP19P56211 112 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 RAC1P63000 192 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 GRIN1Q05586 938 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ADCY1Q08828 1119 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 MYO1EQ12965 1108 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 HTR4Q13639 388 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 NFE2Q16621 373 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-215ENST00000484203 SV2CQ496J9 727 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 SPECC1Q5M775 1068 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 C9orf57Q5W0N0 161 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 JADE1Q6IE81 842 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 USP49Q70CQ1 688 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 GALNT12Q8IXK2 581 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 DCP1BQ8IZD4 617 aaKnown RBP6.64□□□□□ -1.35
PTCD3-215ENST00000484203 CACTIN-AS1Q8N1I8 211 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 TMEM86AQ8N2M4 240 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 LRRC52Q8N7C0 313 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 DNAJC19Q96DA6 116 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 SENP8Q96LD8 212 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 CLIC6Q96NY7 704 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 SPOCK3Q9BQ16 436 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 OSBPL6Q9BZF3 934 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 DNAJC25Q9H1X3 360 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 CXCL16Q9H2A7 254 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 SEMA4AQ9H3S1 761 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 KBTBD4Q9NVX7 518 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 DPP3Q9NY33 737 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 TBC1D7Q9P0N9 293 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 TUBGCP4Q9UGJ1 667 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 USP25Q9UHP3 1055 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 CDH22Q9UJ99 828 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ITGA11Q9UKX5 1188 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 NUMBLQ9Y6R0 609 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 UBE4BO95155 1302 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 NLRC5Q86WI3 1866 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 TCF20Q9UGU0 1960 aaKnown RBP6.64□□□□□ -1.35
PTCD3-215ENST00000484203 TECTAO75443 2155 aa6.64□□□□□ -1.35
PTCD3-215ENST00000484203 ZNF233A6NK53 670 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 KPNA7A9QM74 516 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 I3L4J1 428 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 PIRO00625 290 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 HUS1O60921 280 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 N4BP1O75113 896 aaKnown RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 KIF20AO95235 890 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 F13A1P00488 732 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 FAM163BP0C2L3 166 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 GLULP15104 373 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 PCSK1P29120 753 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 CDC25BP30305 580 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ADSSP30520 456 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 TNFSF9P41273 254 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 MAPK8P45983 427 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 EPHA5P54756 1037 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 MLLT6P55198 1093 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ASIC1P78348 528 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 RBP5P82980 135 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 TSPY1Q01534 308 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 MAPRE1Q15691 268 aaKnown RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 TAF12Q16514 161 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 DUOXA2Q1HG44 320 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 SEZ6Q53EL9 994 aa6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ZC2HC1CQ53FD0 456 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-215ENST00000484203 ARHGAP15Q53QZ3 475 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms