RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TRIM68Q6AZZ1 485 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 FSTL4Q6MZW2 842 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 TRAPPC11Q7Z392 1133 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 ZC3H3Q8IXZ2 948 aaKnown RBP10.69□□□□□ -0.7
CPSF4-213ENST00000484112 RDH13Q8NBN7 331 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 TTC16Q8NEE8 873 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 OR10T2Q8NGX3 314 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 TAF4BQ92750 862 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 SYAP1Q96A49 352 aaPredicted RBP10.69□□□□□ -0.7
CPSF4-213ENST00000484112 CCDC127Q96BQ5 260 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 LOXL4Q96JB6 756 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 SLC46A2Q9BY10 475 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 EBF3Q9H4W6 596 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 VRTNQ9H8Y1 702 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 KIAA1468Q9P260 1216 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 MAN1B1Q9UKM7 699 aa10.69□□□□□ -0.7
CPSF4-213ENST00000484112 RNF40O75150 1001 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 KCNK5O95279 499 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 EGFP01133 1207 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 KRT19P08727 400 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 EPB41P11171 864 aaKnown RBP10.68□□□□□ -0.7
CPSF4-213ENST00000484112 PRKCSHP14314 528 aaPredicted RBP10.68□□□□□ -0.7
CPSF4-213ENST00000484112 ATF6P18850 670 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 AVPR1AP37288 418 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 MPLP40238 635 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 LHX1P48742 406 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 BFSP1Q12934 665 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 TRPC3Q13507 836 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 RUNX3Q13761 415 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 TMEM196Q5HYL7 178 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 CEP135Q66GS9 1140 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 RNF43Q68DV7 783 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 LIMS2Q7Z4I7 341 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 MAB21L3Q8N8X9 362 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 OR5B17Q8NGF7 314 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 TCEAL3Q969E4 200 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 HPDLQ96IR7 371 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 FAXDC2Q96IV6 333 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 CEP63Q96MT8 703 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 HHIPQ96QV1 700 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 CLSTN2Q9H4D0 955 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 IL21Q9HBE4 155 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 LMBRD1Q9NUN5 540 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 SIX4Q9UIU6 781 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 MAPK8IP1Q9UQF2 711 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 ACACBO00763 2458 aa10.68□□□□□ -0.7
CPSF4-213ENST00000484112 PTPRJQ12913 1337 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 OTOL1A6NHN0 477 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 LRRIQ3A6PVS8 624 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 TM4SF5O14894 197 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 AKAP3O75969 853 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 FGFR1OPO95684 399 aaKnown RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 MBD3O95983 291 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 P4HA1P13674 534 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 RAP1GAPP47736 663 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 GALK1P51570 392 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 VAMP7P51809 220 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 MYL7Q01449 175 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 CREB5Q02930 508 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 SGSM1Q2NKQ1 1148 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 ZACNQ401N2 412 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 CT47A1Q5JQC4 288 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 PSAPL1Q6NUJ1 521 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 CC2D1AQ6P1N0 951 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 FAM186BQ8IYM0 893 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 SMYD4Q8IYR2 804 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 DCP1BQ8IZD4 617 aaKnown RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 CMTM8Q8IZV2 173 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 MLKLQ8NB16 471 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 FAM83CQ9BQN1 747 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 ACBD6Q9BR61 282 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 ZCWPW1Q9H0M4 648 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 GZF1Q9H116 711 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 FAM124BQ9H5Z6 455 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 METTL14Q9HCE5 456 aaKnown RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 FBRSL1Q9HCM7 1045 aaKnown RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 HPS4Q9NQG7 708 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 VPS45Q9NRW7 570 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 ABI2Q9NYB9 513 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 MAGED2Q9UNF1 606 aaPredicted RBP10.67□□□□□ -0.7
CPSF4-213ENST00000484112 CCL26Q9Y258 94 aa10.67□□□□□ -0.7
CPSF4-213ENST00000484112 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 EPG5Q9HCE0 2579 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 CCDC163A0A0D9SF12 145 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 TRDMT1O14717 391 aaKnown RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 GABRDO14764 452 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 DCLK1O15075 740 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 PHACTR2O75167 634 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 TACC1O75410 805 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 GNA14O95837 355 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 C4BPAP04003 597 aaKnown RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 HAPLN1P10915 354 aaPredicted RBP10.66□□□□□ -0.7
CPSF4-213ENST00000484112 ARSAP15289 507 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 PCSK1P29120 753 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 WEE1P30291 646 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 GBP1P32455 592 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 CASP4P49662 377 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 GPR15P49685 360 aa10.66□□□□□ -0.7
CPSF4-213ENST00000484112 AMPD2Q01433 879 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms