RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 MAPK8IP1Q9UQF2 711 aa9.61□□□□□ -0.87
COL8A1-207ENST00000483969 FAM50BQ9Y247 325 aa9.61□□□□□ -0.87
COL8A1-207ENST00000483969 FRMD4BQ9Y2L6 1034 aa9.61□□□□□ -0.87
COL8A1-207ENST00000483969 ANO9A1A5B4 782 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 A6NHS1 94 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 PIRO00625 290 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 EIF4EBP3O60516 100 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-207ENST00000483969 PHACTR2O75167 634 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 TNNC2P02585 160 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 NR3C1P04150 777 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 NFICP08651 508 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 CNPP09543 421 aaKnown RBP9.6□□□□□ -0.87
COL8A1-207ENST00000483969 TMEM191BP0C7N4 346 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-207ENST00000483969 TNNI1P19237 187 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 KCNA5P22460 613 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 GTF2F1P35269 517 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL8A1-207ENST00000483969 PNPLA4P41247 253 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 BRCC3P46736 316 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 AP3M2P53677 418 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 RBP5P82980 135 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 ADAM9Q13443 819 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 PSMD6Q15008 389 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 LEXMQ3ZCV2 418 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 C9orf57Q5W0N0 161 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 USP37Q86T82 979 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 CSGALNACT2Q8N6G5 542 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 ZSWIM2Q8NEG5 633 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 LNX1Q8TBB1 728 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-207ENST00000483969 HDAC7Q8WUI4 952 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 NXPE3Q969Y0 559 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 DHTKD1Q96HY7 919 aaPredicted RBP9.6□□□□□ -0.87
COL8A1-207ENST00000483969 MFSD14AQ96MC6 490 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 ASB2Q96Q27 587 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 PDE11AQ9HCR9 933 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 CYP4F12Q9HCS2 524 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 LMBRD1Q9NUN5 540 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 INTS13Q9NVM9 706 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 BACE2Q9Y5Z0 518 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 WDR81Q562E7 1941 aa9.6□□□□□ -0.87
COL8A1-207ENST00000483969 I3L4J1 428 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 M0QZQ0 153 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 CETN3O15182 167 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 MAPK13O15264 365 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 TEX28O15482 410 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 LINC01565O15544 149 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 IGFBP6P24592 240 aaPredicted RBP9.59□□□□□ -0.87
COL8A1-207ENST00000483969 LTBRP36941 435 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 PRCPP42785 496 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 TAF6P49848 677 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 LILRA4P59901 499 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 KCNC3Q14003 757 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 PSMD5Q16401 504 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 CAMK4Q16566 473 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 EDRF1Q3B7T1 1238 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 SV2CQ496J9 727 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 RTP2Q5QGT7 225 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 ISM2Q6H9L7 571 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 ANKRD54Q6NXT1 300 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 LLGL2Q6P1M3 1020 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 VN1R5Q7Z5H4 357 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 METTL23Q86XA0 190 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 EFCAB13Q8IY85 973 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 ADSSL1Q8N142 457 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 TRIML1Q8N9V2 468 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 C3orf58Q8NDZ4 430 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 SLC22A17Q8WUG5 538 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 ERCC4Q92889 916 aaPredicted RBP9.59□□□□□ -0.87
COL8A1-207ENST00000483969 CCDC127Q96BQ5 260 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 B3GALT6Q96L58 329 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 ZNF560Q96MR9 790 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 TMPRSS13Q9BYE2 586 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 BHLHE41Q9C0J9 482 aaPredicted RBP9.59□□□□□ -0.87
COL8A1-207ENST00000483969 PLEKHA4Q9H4M7 779 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 CD207Q9UJ71 328 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 MAN1B1Q9UKM7 699 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 ITGA11Q9UKX5 1188 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 DSEQ9UL01 958 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 AGAP1Q9UPQ3 857 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 HCFC2Q9Y5Z7 792 aa9.59□□□□□ -0.87
COL8A1-207ENST00000483969 LOXHD1Q8IVV2 1947 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 KPNA7A9QM74 516 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 PSMA7O14818 248 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 GLUD1P00367 558 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 ITGB3P05106 788 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 KRT19P08727 400 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 DLATP10515 647 aaKnown RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 ODC1P11926 461 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 KRT13P13646 458 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 TYMPP19971 482 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 NR2F2P24468 414 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 TKTP29401 623 aaKnown RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 PSMC2P35998 433 aaKnown RBP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 AARSP49588 968 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL8A1-207ENST00000483969 CLCN4P51793 760 aa9.58□□□□□ -0.88
COL8A1-207ENST00000483969 FKBP3Q00688 224 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms