RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 POMGNT1Q8WZA1 660 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 SAAL1Q96ER3 474 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 AK8Q96MA6 479 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 FAM213AQ9BRX8 229 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 CRTAC1Q9NQ79 661 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 TMEM30AQ9NV96 361 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 PTPRJQ12913 1337 aa13.82□□□□□ -0.2
UBR4-213ENST00000483922 CACNA1EQ15878 2313 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 FAM221BA6H8Z2 402 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 HUS1O60921 280 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 DDIT3P35638 169 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 UBA7P41226 1012 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 MAPK8P45983 427 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 CASP5P51878 434 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 NR1H3Q13133 447 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 DYMQ7RTS9 669 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 C11orf74Q86VG3 221 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 TTC30AQ86WT1 665 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 SFR1Q86XK3 245 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 NT5DC4Q86YG4 428 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 SPATA2LQ8IUW3 424 aaPredicted RBP13.81□□□□□ -0.2
UBR4-213ENST00000483922 PHTF2Q8N3S3 785 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 CSGALNACT2Q8N6G5 542 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 PILRBQ9UKJ0 227 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 MSRB2Q9Y3D2 182 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 SNX9Q9Y5X1 595 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 ATXN2Q99700 1313 aaKnown RBP13.81□□□□□ -0.2
UBR4-213ENST00000483922 PCNX2A6NKB5 2137 aa13.81□□□□□ -0.2
UBR4-213ENST00000483922 GOLGA8IPA6NC78 632 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 TMEM8BA6NDV4 472 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 ZNF840PA6NDX5 716 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 GOLGA8JA6NMD2 632 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 TNFRSF10BO14763 440 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 SLC26A4O43511 780 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 IL18RAPO95256 599 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 KLF8O95600 359 aaPredicted RBP13.8□□□□□ -0.2
UBR4-213ENST00000483922 OLFM2O95897 454 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 KRT18P05783 430 aaKnown RBP13.8□□□□□ -0.2
UBR4-213ENST00000483922 ITPKAP23677 461 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 TIE1P35590 1138 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 PNPLA4P41247 253 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 MAGEA11P43364 429 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 CACNA2D1P54289 1103 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 PSMC1P62191 440 aaKnown RBP13.8□□□□□ -0.2
UBR4-213ENST00000483922 MRPS21P82921 87 aaKnown RBP13.8□□□□□ -0.2
UBR4-213ENST00000483922 MYL7Q01449 175 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 DHCR24Q15392 516 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 PEAR1Q5VY43 1037 aaPredicted RBP13.8□□□□□ -0.2
UBR4-213ENST00000483922 SLC23A3Q6PIS1 610 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 SYT12Q8IV01 421 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 TMEM86AQ8N2M4 240 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 DEFB119Q8N690 84 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 LRRC52Q8N7C0 313 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 ZCCHC14Q8WYQ9 949 aaKnown RBP13.8□□□□□ -0.2
UBR4-213ENST00000483922 LARP4BQ92615 738 aaKnown RBP13.8□□□□□ -0.2
UBR4-213ENST00000483922 MYLPFQ96A32 169 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 DNAJC19Q96DA6 116 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 CALML4Q96GE6 196 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 FUBP3Q96I24 572 aaKnown RBP eCLIP13.8□□□□□ -0.2
UBR4-213ENST00000483922 EPSTI1Q96J88 318 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 ZNF560Q96MR9 790 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 PDE11AQ9HCR9 933 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 TBC1D7Q9P0N9 293 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 NEUROG3Q9Y4Z2 214 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 IGSF10Q6WRI0 2623 aa13.8□□□□□ -0.2
UBR4-213ENST00000483922 MYMKA6NI61 221 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 NFATC1O95644 943 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 BDNFP23560 247 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 SLC7A9P82251 487 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 LMBRD2Q68DH5 695 aaPredicted RBP13.79□□□□□ -0.2
UBR4-213ENST00000483922 ADGRF2Q8IZF7 708 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 CHCHD4Q8N4Q1 142 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 TOP6BLQ8N6T0 577 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 OR5B17Q8NGF7 314 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 OR2I1PQ8NGU4 316 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 WBP2Q969T9 261 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 EXOC4Q96A65 974 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 CBWD1Q9BRT8 395 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 TTLL2Q9BWV7 592 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 PCIF1Q9H4Z3 704 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 LHX6Q9UPM6 363 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 GON4LQ3T8J9 2241 aa13.79□□□□□ -0.2
UBR4-213ENST00000483922 HELZP42694 1942 aaKnown RBP13.78□□□□□ -0.2
UBR4-213ENST00000483922 ADAMTS9Q9P2N4 1935 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 MYOFQ9NZM1 2061 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 UPK3BL1B0FP48 263 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 UPK3BL2E5RIL1 263 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 TULP1O00294 542 aaPredicted RBP13.78□□□□□ -0.2
UBR4-213ENST00000483922 TRIM24O15164 1050 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 TBCAO75347 108 aaKnown RBP13.78□□□□□ -0.2
UBR4-213ENST00000483922 KAT7O95251 611 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 CD2BP2O95400 341 aaKnown RBP13.78□□□□□ -0.2
UBR4-213ENST00000483922 OAS1P00973 400 aaKnown RBP13.78□□□□□ -0.2
UBR4-213ENST00000483922 CD59P13987 128 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 LHX1P48742 406 aa13.78□□□□□ -0.2
UBR4-213ENST00000483922 SIM1P81133 766 aaPredicted RBP13.78□□□□□ -0.2
UBR4-213ENST00000483922 LMAN2Q12907 356 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms