RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 KMT2EQ8IZD2 1858 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 FAM92AA1XBS5 289 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 AP1G2O75843 785 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 RTN3O95197 1032 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-225ENST00000483506 PDGFBP01127 241 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-225ENST00000483506 CFHP08603 1231 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 PFKLP17858 780 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 PSMC3P17980 439 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 PPP3CCP48454 512 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 RAD23BP54727 409 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 FCHO2Q0JRZ9 810 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 NUP93Q8N1F7 819 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 EHBP1Q8NDI1 1231 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 DNASE1L2Q92874 299 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 CYFIP2Q96F07 1278 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 TMEM176AQ96HP8 235 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 KCNK16Q96T55 309 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 TRPV5Q9NQA5 729 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 COMMD8Q9NX08 183 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 FBXL21Q9UKT6 434 aa19.09■□□□□ 0.65
HDAC6-225ENST00000483506 MYH10P35580 1976 aa19.08■□□□□ 0.65
HDAC6-225ENST00000483506 GTPBP10A4D1E9 387 aaKnown RBP19.08■□□□□ 0.64
HDAC6-225ENST00000483506 KRBA1A5PL33 1030 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 HEPACAM2A8MVW5 462 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 PRAMEF12O95522 483 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 FAM200BP0CF97 657 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 GCNT1Q02742 428 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 ZNF268Q14587 947 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-225ENST00000483506 TXNDC8Q6A555 127 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 CLEC20AQ6ZU45 233 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 FAM114A1Q8IWE2 563 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 MAB21L3Q8N8X9 362 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 OVCA2Q8WZ82 227 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 TRMT61BQ9BVS5 477 aaKnown RBP19.08■□□□□ 0.64
HDAC6-225ENST00000483506 PNPLA8Q9NP80 782 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 ARHGEF3Q9NR81 526 aa19.08■□□□□ 0.64
HDAC6-225ENST00000483506 ARNTLO00327 626 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 BEST1O76090 585 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 NPR3P17342 541 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 ACO1P21399 889 aaKnown RBP19.07■□□□□ 0.64
HDAC6-225ENST00000483506 SLC5A3P53794 718 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 LRMPQ12912 555 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 TPD52L1Q16890 204 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-225ENST00000483506 ZNF394Q53GI3 561 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 PPP1R26Q5T8A7 1209 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-225ENST00000483506 ARHGAP17Q68EM7 881 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 SIX5Q8N196 739 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 CELF5Q8N6W0 485 aaKnown RBP19.07■□□□□ 0.64
HDAC6-225ENST00000483506 ENOX1Q8TC92 643 aaKnown RBP19.07■□□□□ 0.64
HDAC6-225ENST00000483506 LRRC3BQ96PB8 259 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 INTS2Q9H0H0 1204 aaKnown RBP19.07■□□□□ 0.64
HDAC6-225ENST00000483506 KIF9Q9HAQ2 790 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 GCNT4Q9P109 453 aa19.07■□□□□ 0.64
HDAC6-225ENST00000483506 HELZP42694 1942 aaKnown RBP19.06■□□□□ 0.64
HDAC6-225ENST00000483506 ZNF840PA6NDX5 716 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 HHLA1C9JL84 531 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 YWHAQP27348 245 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 ADORA2BP29275 332 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 AVPR1AP37288 418 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 PDE6CP51160 858 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 GRM2Q14416 872 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 MAN2A1Q16706 1144 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 SNX30Q5VWJ9 437 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 CWF19L1Q69YN2 538 aaKnown RBP19.06■□□□□ 0.64
HDAC6-225ENST00000483506 PHLDB3Q6NSJ2 640 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 SUGP1Q8IWZ8 645 aaKnown RBP19.06■□□□□ 0.64
HDAC6-225ENST00000483506 PPM1KQ8N3J5 372 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 PDZD8Q8NEN9 1154 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 IRF7Q92985 503 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 USP13Q92995 863 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-225ENST00000483506 JAKMIP2Q96AA8 810 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 HEXIM2Q96MH2 286 aaKnown RBP19.06■□□□□ 0.64
HDAC6-225ENST00000483506 SLITRK1Q96PX8 696 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 DDX23Q9BUQ8 820 aaKnown RBP19.06■□□□□ 0.64
HDAC6-225ENST00000483506 DUSP16Q9BY84 665 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 TRPM5Q9NZQ8 1165 aa19.06■□□□□ 0.64
HDAC6-225ENST00000483506 TRAV19A0A0A6YYK7 116 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 CHADO15335 359 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 OLFM2O95897 454 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 PRKCSHP14314 528 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-225ENST00000483506 TCF3P15923 654 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 GDI1P31150 447 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 CLCN5P51795 746 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 MAP3K7CLP57077 242 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 STARD6P59095 220 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 PRKCQQ04759 706 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 TAF10Q12962 218 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 SMYD5Q6GMV2 418 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 TRIM65Q6PJ69 517 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 SASS6Q6UVJ0 657 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 ARHGEF19Q8IW93 802 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 SCAMP5Q8TAC9 235 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 BRD9Q9H8M2 597 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 TDP1Q9NUW8 608 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 ANO10Q9NW15 660 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 TMEM63CQ9P1W3 806 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 KIAA1257Q9ULG3 409 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 CA14Q9ULX7 337 aa19.05■□□□□ 0.64
HDAC6-225ENST00000483506 CNTN6Q9UQ52 1028 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms